PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743075.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 717aa MW: 76663.1 Da PI: 6.016

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.8	0.0001	471	491	35	55
TS-STCHHHHHHHHHHHHHHH CS HLH 35 skKlsKaeiLekAveYIksLq 55 s++++Ka++L +A+eY+k Lq XP_022743075.1 471 SERVDKASMLDEAIEYLKTLQ 491 7899****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 717 aa Download sequence
MPLSELYRKA RGKRDSSQDK NPSCSTGLSF VPENDFVELV WENGQISIQG QSSRSRKIPA 60 CNSLPSHCLP SHTPKSRDKD TGNGGTNSKM GKFVAMDSVL SEIPMSVPSG EMGMNQDDEV 120 VPWLNYPGDQ SLQNECSDFL PELSRVTANE TPTHSNFASF DRRSQSIRDF STASINDGAG 180 FEQGNLSKVP RLADGEAGPR TATAQLCMLP SQVCQTSLSY FRSRILENIG NSLGHTSTHH 240 GICGDSMGVQ TSDGGLPGNK RQKQDPTPPC NNTVLMNFSH FSRPAALVKA SLQNIGAMAS 300 IGSKEKGSAA SICNPADTML IDSNIELQEE KFSRCQPTMV PVKTDVIQSE AKSLDEMVAA 360 EPTDAICEEN VLKNDKNPSQ VIGESASKGL LGGDNAVESV FAASSVCSGN IVERASDNPV 420 NNLKRKNHDN EESECPSEDA EEESVGVKKA VPARGGVGSK RSRAAEVHNL SERVDKASML 480 DEAIEYLKTL QLQVLFMSMG AGLYMPPMML PTGMLHMHGA HMAHFSPMGV GMGFGMPLPD 540 MNTGSSTCPM VQVPPICGTP FSDPGPHMSG PTALHGMAGS NVHLFGLHGQ GFPMSMPRGP 600 LIPISGGHLM KSTMGACGLV GPMDNMYSAR ATSSKDPLQN INSQAVRNTN MNSSMNQTPT 660 QCPTTNQSFE QPNAVRENVQ SSEITGSVPF RSADGNEKLP DSFVDRRRGI HFASGGC

Sequence ? help Back to Top

Protein Sequence Length: 717 aa Download sequence

MPLSELYRKA RGKRDSSQDK NPSCSTGLSF VPENDFVELV WENGQISIQG QSSRSRKIPA  60
CNSLPSHCLP SHTPKSRDKD TGNGGTNSKM GKFVAMDSVL SEIPMSVPSG EMGMNQDDEV  120
VPWLNYPGDQ SLQNECSDFL PELSRVTANE TPTHSNFASF DRRSQSIRDF STASINDGAG  180
FEQGNLSKVP RLADGEAGPR TATAQLCMLP SQVCQTSLSY FRSRILENIG NSLGHTSTHH  240
GICGDSMGVQ TSDGGLPGNK RQKQDPTPPC NNTVLMNFSH FSRPAALVKA SLQNIGAMAS  300
IGSKEKGSAA SICNPADTML IDSNIELQEE KFSRCQPTMV PVKTDVIQSE AKSLDEMVAA  360
EPTDAICEEN VLKNDKNPSQ VIGESASKGL LGGDNAVESV FAASSVCSGN IVERASDNPV  420
NNLKRKNHDN EESECPSEDA EEESVGVKKA VPARGGVGSK RSRAAEVHNL SERVDKASML  480
DEAIEYLKTL QLQVLFMSMG AGLYMPPMML PTGMLHMHGA HMAHFSPMGV GMGFGMPLPD  540
MNTGSSTCPM VQVPPICGTP FSDPGPHMSG PTALHGMAGS NVHLFGLHGQ GFPMSMPRGP  600
LIPISGGHLM KSTMGACGLV GPMDNMYSAR ATSSKDPLQN INSQAVRNTN MNSSMNQTPT  660
QCPTTNQSFE QPNAVRENVQ SSEITGSVPF RSADGNEKLP DSFVDRRRGI HFASGGC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	8	15	RKARGKRD
2	257	264	PGNKRQKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	4e-49	bHLH family protein