PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743098.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 681aa MW: 75203.6 Da PI: 7.0473

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.7	1.1e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g++W++++iyr++++r++lt+GW++Fv+ ++L +gD++vF + + XP_022743098.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfpsldynAEPPVQ--TILAKDVHGEVWKFRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSIVFL--RAE 211 89**************************985444444..8999*****************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_022743098.1 212 NGDLRVGIRRA 222 8889**996 PP
2	Auxin_resp	112.8	3.2e-37	282	365	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa++a++ ++FevvY+Prast+eF+vk+++v++a+++++++GmRfkmafetedss++++ +Gt+++ + +dp+ Wp+S+Wr+L+ XP_022743098.1 282 AATRAANWQPFEVVYYPRASTPEFCVKASSVRAAMQIQWCPGMRFKMAFETEDSSRISWfMGTISAAQVVDPILWPDSPWRLLQ 365 688999****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MITVMDSRKE LPKNSEKCLD PQLWHACAGG MVQMPSVNSK VFYFPQGHAE HANGNVDFGS 60 LPIPSLILCR ISAIKYMADP ETDEVYSKIM LVPLRENDFG YEDDDFDGNS GMENPEKPAS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPSL DYNAEPPVQT ILAKDVHGEV WKFRHIYRGT 180 PRRHLLTTGW SNFVNHKKLV AGDSIVFLRA ENGDLRVGIR RAKRGIGSGH EYPSGWNSGG 240 GSSASQFGGY SPFLREEDSR LMRKDSNGDL RGKVRVDSVI KAATRAANWQ PFEVVYYPRA 300 STPEFCVKAS SVRAAMQIQW CPGMRFKMAF ETEDSSRISW FMGTISAAQV VDPILWPDSP 360 WRLLQVAWDE PDLLHNVKRV SPWLVELVTN MPAIHLNPFS PPRKKMRLPQ HPDFSPLSQI 420 PMPSFSCSSF RSSSPVCCIT DNIPGGIQGA RHATFGLSSS DLQSNKLQSG LFPLRFHQLD 480 HAARPTRLSS DNGNNRNISS LLTMGNPTRS LKESNEIKTP HILLFGRVIF SEQQGSQSCS 540 GDTVGNSSSD GNTEKTAISS DGLGSALHQN AQENSSDEGY RWCKGHKKSD LGLETGHCKV 600 FMESENVGRT LDLSVLGSYE ELHGKLANMF GIESSEMLSS VLYCDAAGSV KHTGDEPFSE 660 FLKTARRLTI LTDSGSDNIG R

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MITVMDSRKE LPKNSEKCLD PQLWHACAGG MVQMPSVNSK VFYFPQGHAE HANGNVDFGS  60
LPIPSLILCR ISAIKYMADP ETDEVYSKIM LVPLRENDFG YEDDDFDGNS GMENPEKPAS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPSL DYNAEPPVQT ILAKDVHGEV WKFRHIYRGT  180
PRRHLLTTGW SNFVNHKKLV AGDSIVFLRA ENGDLRVGIR RAKRGIGSGH EYPSGWNSGG  240
GSSASQFGGY SPFLREEDSR LMRKDSNGDL RGKVRVDSVI KAATRAANWQ PFEVVYYPRA  300
STPEFCVKAS SVRAAMQIQW CPGMRFKMAF ETEDSSRISW FMGTISAAQV VDPILWPDSP  360
WRLLQVAWDE PDLLHNVKRV SPWLVELVTN MPAIHLNPFS PPRKKMRLPQ HPDFSPLSQI  420
PMPSFSCSSF RSSSPVCCIT DNIPGGIQGA RHATFGLSSS DLQSNKLQSG LFPLRFHQLD  480
HAARPTRLSS DNGNNRNISS LLTMGNPTRS LKESNEIKTP HILLFGRVIF SEQQGSQSCS  540
GDTVGNSSSD GNTEKTAISS DGLGSALHQN AQENSSDEGY RWCKGHKKSD LGLETGHCKV  600
FMESENVGRT LDLSVLGSYE ELHGKLANMF GIESSEMLSS VLYCDAAGSV KHTGDEPFSE  660
FLKTARRLTI LTDSGSDNIG R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein