PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743219.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 311aa    MW: 35212.4 Da    PI: 8.7396
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.85.7e-092974346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+eE + + +a +++ ++   +W ++a++++ g+t  +++  ++ 
   XP_022743219.1 29 KWTPEENKCFENALALYDKDtpdRWFKVAAMIP-GKTVGDVIKQYRE 74
                     8********************************.******9999986 PP
2Myb_DNA-binding47.25.2e-15137181347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_022743219.1 137 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 181
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MMNRGLEILS PGSYLQTSNW LFQESKGTKW TPEENKCFEN ALALYDKDTP DRWFKVAAMI  60
PGKTVGDVIK QYRELEEDVS DIEAGLIPIP GYSSDSFTLE WVNDSHGFDG FRQYYTTGGK  120
RGTGTRPSDQ ERKKGVPWTE EEHRQFLMGL KKYGKGDWRN ISRNFVTTRT PTQVASHAQK  180
YFIRQLTGGK DKRRSSIHDI TTVNIPDTPS SSPDHSRPLC PNNSSAVVQP QQQLKVAGVT  240
KELFDFEWKQ QNEGAAMVFN QTSGNAFLSP FCGVSSHAPK LEEQNLLRGP LPRSQFGSYN  300
TLFPMQSMQR P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-126MYB family protein