PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743325.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 710aa MW: 78495.9 Da PI: 7.4233

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.6	4.7e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + + +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + + XP_022743325.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--AILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAE 211 89**************************996555555..69999****************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_022743325.1 212 NGDLCVGIRRA 222 8999**997 PP
2	Auxin_resp	112.7	3.5e-37	290	373	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a++++ F+vvY+Pr+st+eF+vk++ v++al+++++ GmRfkmafetedss++++ +Gt+++v+ +dp+rWp+S+Wr+L+ XP_022743325.1 290 AATLAANGQQFDVVYYPRSSTPEFCVKASLVKTALQIRWCSGMRFKMAFETEDSSRISWfMGTISSVQVADPLRWPDSPWRLLQ 373 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 710 aa Download sequence
MITFMDSNEK LKEMEKCLDS QLWHACAGGM VQMPSVNTKV FYFPQGHAEH ACGPVDFSKC 60 PRIPAYILCR VAAVKFMADP ETDEVFAKIR LIPVSTNEPD FEDDGIGSIH GNETQEKPAS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQA ILAKDVHGET WKFRHIYRGT 180 PRRHLLTTGW STFVNHKKLV AGDSIVFLRA ENGDLCVGIR RAKRGIGGGP ESSSGWNVTG 240 GNCMVPYGGF SAFLREDENK LMRNCSNNGL SSNSNLMGKR KVRPEQVIEA ATLAANGQQF 300 DVVYYPRSST PEFCVKASLV KTALQIRWCS GMRFKMAFET EDSSRISWFM GTISSVQVAD 360 PLRWPDSPWR LLQVTWDEPD LLLNVKRVSP WLVELVSNMP PTIHLSPFSP PRKKLRLPQH 420 PDFPLDCQLP MPTFSGNLLG SSNPFGFLPN TTPAGMQGAR HAHYGLSLSD LHLNKLQSGL 480 YPGGFSPLDH AATPNKTSNG GSIVQKPSMS ENVSRVLTMA HSTQNSKKTD DAKTHHLVLF 540 GQPILTEQQI SLSCSVDTIS PVLTGNSSSD GNLDKTANFS DGSGSALHRQ GPPECTTRED 600 FRWYKDNRLE AEPNLETGHC KIFMESEDVG RTLDLSLLGS YDELHRKLAE MFGMKNSGTL 660 SHLLYRDATG AVKQIGDELF SDFMKTARRL TILMDSSSDN GGEYRGRNKP

Sequence ? help Back to Top

Protein Sequence Length: 710 aa Download sequence

MITFMDSNEK LKEMEKCLDS QLWHACAGGM VQMPSVNTKV FYFPQGHAEH ACGPVDFSKC  60
PRIPAYILCR VAAVKFMADP ETDEVFAKIR LIPVSTNEPD FEDDGIGSIH GNETQEKPAS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSADPPVQA ILAKDVHGET WKFRHIYRGT  180
PRRHLLTTGW STFVNHKKLV AGDSIVFLRA ENGDLCVGIR RAKRGIGGGP ESSSGWNVTG  240
GNCMVPYGGF SAFLREDENK LMRNCSNNGL SSNSNLMGKR KVRPEQVIEA ATLAANGQQF  300
DVVYYPRSST PEFCVKASLV KTALQIRWCS GMRFKMAFET EDSSRISWFM GTISSVQVAD  360
PLRWPDSPWR LLQVTWDEPD LLLNVKRVSP WLVELVSNMP PTIHLSPFSP PRKKLRLPQH  420
PDFPLDCQLP MPTFSGNLLG SSNPFGFLPN TTPAGMQGAR HAHYGLSLSD LHLNKLQSGL  480
YPGGFSPLDH AATPNKTSNG GSIVQKPSMS ENVSRVLTMA HSTQNSKKTD DAKTHHLVLF  540
GQPILTEQQI SLSCSVDTIS PVLTGNSSSD GNLDKTANFS DGSGSALHRQ GPPECTTRED  600
FRWYKDNRLE AEPNLETGHC KIFMESEDVG RTLDLSLLGS YDELHRKLAE MFGMKNSGTL  660
SHLLYRDATG AVKQIGDELF SDFMKTARRL TILMDSSSDN GGEYRGRNKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein