PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743357.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 571aa MW: 62348.6 Da PI: 4.7643

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.4e-18	55	102	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+d+vk++G g+W+++ ++ g+ R++k+c++rw ++l XP_022743357.1 55 KGPWTSAEDAILIDYVKKHGEGNWNAVQKHSGLLRCGKSCRLRWANHL 102 79****************************99********9986 PP
2	Myb_DNA-binding	53.8	4.3e-17	108	151	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l++++++++G++ W++ a++++ gRt++++k++w++ XP_022743357.1 108 KGAFTQEEEQLIIELHAKMGNK-WARMASHLP-GRTDNEIKNYWNT 151 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MVLTCWWGFV HDYKEMSHTK NEREDVMFSK DQTESPLVDD DNCGGGAGGG VVLKKGPWTS 60 AEDAILIDYV KKHGEGNWNA VQKHSGLLRC GKSCRLRWAN HLRPNLKKGA FTQEEEQLII 120 ELHAKMGNKW ARMASHLPGR TDNEIKNYWN TRIKRRQRAG LPLYPPEVCL QAKQESHSSS 180 AVNGGDRGPH DILQNNSYEI PDVIFDSLKA NQSVLPYVPE LPDLSASSML MKGLGSSPYC 240 GFISPTIHRQ KRLRESTAFF PSYTGAVKSE GPLFEQFQDD MLDKAARSFE LPFPIEPDPT 300 AKNSQSFGVF LGSHAISNGN FSASEPTLEA VKLELPSLQY PETELGNWGT LSCPPPLLEN 360 VDAFIQSPPP TSGVESDSLL PRNSGLLDAL LHEAKTLSSA KNHASDKSSN SSTPGDIAES 420 SNFNICETDR ENCGEPLSPV GHSATSLFSE CISASGSSLD GQPPIETFTE SHVKSEPADL 480 VLTPEIQKET PIQLDSNCPD NLFASNWLDQ GSGFDKDQTI MTDAIASLLG DDLSSEYKNM 540 AAATSISSQA WGLGSCAWNN MPAVCQMPEL P

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MVLTCWWGFV HDYKEMSHTK NEREDVMFSK DQTESPLVDD DNCGGGAGGG VVLKKGPWTS  60
AEDAILIDYV KKHGEGNWNA VQKHSGLLRC GKSCRLRWAN HLRPNLKKGA FTQEEEQLII  120
ELHAKMGNKW ARMASHLPGR TDNEIKNYWN TRIKRRQRAG LPLYPPEVCL QAKQESHSSS  180
AVNGGDRGPH DILQNNSYEI PDVIFDSLKA NQSVLPYVPE LPDLSASSML MKGLGSSPYC  240
GFISPTIHRQ KRLRESTAFF PSYTGAVKSE GPLFEQFQDD MLDKAARSFE LPFPIEPDPT  300
AKNSQSFGVF LGSHAISNGN FSASEPTLEA VKLELPSLQY PETELGNWGT LSCPPPLLEN  360
VDAFIQSPPP TSGVESDSLL PRNSGLLDAL LHEAKTLSSA KNHASDKSSN SSTPGDIAES  420
SNFNICETDR ENCGEPLSPV GHSATSLFSE CISASGSSLD GQPPIETFTE SHVKSEPADL  480
VLTPEIQKET PIQLDSNCPD NLFASNWLDQ GSGFDKDQTI MTDAIASLLG DDLSSEYKNM  540
AAATSISSQA WGLGSCAWNN MPAVCQMPEL P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-137	MYB family protein