PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743380.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 314aa MW: 35875.8 Da PI: 6.1174

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743380.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	82.6	3.8e-26	129	189	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqKe+ +s+ prsY+rCt + gC+++k+v+r ++dp++ ++tY+g+H+++ XP_022743380.1 129 EDGHAWRKYGQKEILNSKQPRSYFRCTRKydqGCRATKQVQRMEDDPQMYQTTYSGTHTCT 189 7************************998899************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MGSLSPWPER LSSNKKRAIQ ELAQGQEFTT QLQILLHKPS EEGVSLLAME LAQKILRSFN 60 QTISLLSSVD SAEVSKNQAT SNDDSPCCDD RRSENSSESR KRPASKDRRG RYKRKRDAQT 120 WTVVSATTED GHAWRKYGQK EILNSKQPRS YFRCTRKYDQ GCRATKQVQR MEDDPQMYQT 180 TYSGTHTCTH LFKAPQIIKD SESWESQMVT SGDSKIPSKQ HHHHLNPTTA PNVKQESKEE 240 TTPSDLTDLD SIMWKDIMAG AFEYSSEPGM VSDYGNAVYN VYPCIEITSR NFGLDFEIKP 300 VEFENDFEFD ESDV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	116	RKRPASKDRRGRYKRKR
2	108	117	RRGRYKRKRD
3	113	140	KRKRDAQTWTVVSATTEDGHAWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	3e-36	WRKY family protein