PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743385.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 401aa MW: 44102.8 Da PI: 7.8611

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.2	9.1e-34	47	101	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl XP_022743385.1 47 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 101 79****************************************************8 PP
2	Myb_DNA-binding	65.9	7.4e-21	49	100	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_022743385.1 49 RLKWTPDLHERFIEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 100 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MYHHHHQHQG KNIHPSSRMP IPPARHLFLQ GGNGTGDCGL VLSTDAKPRL KWTPDLHERF 60 IEAVNQLGGA DKATPKTVMK LMGIPGLTLY HLKSHLQKYR LSKNLHGLAN NGSNKIGAVA 120 MGGDRMSEAN GMHMNNLSIG PQTNKGLQIG EALQMQIEVQ RRLHEQLEVQ RHLQLRIEAQ 180 GKYLQAVLEK AQETLGGQNL GTVGLEAAKV QLSELVSKVS NQCLNSAFSD LKDLQGLSHQ 240 QTQATPPTDC SMDSCLTSCE GSQKEQEIHN NGICLRAYSS SSLLEQRGQI AEDPLPLQTE 300 LKSFEDIKKN KLFLSSIGKD AERKMFFADR SSSDLSMSVG LQGEKGNGSN NCSFSEGKGN 360 KRADTVDRLP YFVTKLDLNV HEENDAASSC KQFDLNGLSW S

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MYHHHHQHQG KNIHPSSRMP IPPARHLFLQ GGNGTGDCGL VLSTDAKPRL KWTPDLHERF  60
IEAVNQLGGA DKATPKTVMK LMGIPGLTLY HLKSHLQKYR LSKNLHGLAN NGSNKIGAVA  120
MGGDRMSEAN GMHMNNLSIG PQTNKGLQIG EALQMQIEVQ RRLHEQLEVQ RHLQLRIEAQ  180
GKYLQAVLEK AQETLGGQNL GTVGLEAAKV QLSELVSKVS NQCLNSAFSD LKDLQGLSHQ  240
QTQATPPTDC SMDSCLTSCE GSQKEQEIHN NGICLRAYSS SSLLEQRGQI AEDPLPLQTE  300
LKSFEDIKKN KLFLSSIGKD AERKMFFADR SSSDLSMSVG LQGEKGNGSN NCSFSEGKGN  360
KRADTVDRLP YFVTKLDLNV HEENDAASSC KQFDLNGLSW S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-156	G2-like family protein