PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743501.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 328aa    MW: 35969.8 Da    PI: 9.9588
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA94.81e-29160216158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++I++RR +Rak+  e+k+ +k+rkpy+h SRh hA+rRpRg+gGrF
  XP_022743501.1 160 DGPIYVNAKQYNGIIRRRRSRAKVVLENKV-TKARKPYMHYSRHLHAMRRPRGCGGRF 216
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MGMQTLYLKE HDGIVHNPMG QLASVPSLPW WSALGSQSVY GESCGQLKPL LMEHPSNGDH  60
VTSAKQSGRG TEQELNKGNL SQFTIFPGDC KNTGNGQKTQ AVISLQSAQS EHRARFELGF  120
GQPMVCSKYP YMDQCYGVFS TYGSQIAGRV MLPLSLTTED GPIYVNAKQY NGIIRRRRSR  180
AKVVLENKVT KARKPYMHYS RHLHAMRRPR GCGGRFLNTK CLKSGTDGME MKKAAEGKLS  240
HLRGSQNSEV LQSDSGTLNS SKKASGGGST LSGSEVTSMY SRGDLEQFRF NHLGLSVHSF  300
PSMMDNGRGT VISSKWIATA DNCCNLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.22e-61NF-YA family protein