PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743509.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 218aa    MW: 23869.2 Da    PI: 8.9447
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260132.51.7e-41441431100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++C+++pyf  ++p+kfa vhk+FGasnv+k+l ++pe++r d+++slvyeA++r+ dPvyG++g i++lqqq+++l+ael+
  XP_022743509.1  44 PCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADTANSLVYEANVRLGDPVYGCMGAISALQQQVQSLQAELN 138
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022743509.1 139 AVRAE 143
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MSRERERVDE IGKKIKREAD VSSNHQMGRR HMLGPPGTLN TITPCAACKL LRRRCAQECP  60
FSPYFSPHEP QKFASVHKVF GASNVSKMLM EVPESQRADT ANSLVYEANV RLGDPVYGCM  120
GAISALQQQV QSLQAELNAV RAEIIKYKYR EANLLSSSHV ALLSPGVVSI AAPPQPAPIQ  180
PPTPPPALPP TPTSSMYTQR TTTADYSTIS NENVSYFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.12e-86LBD family protein