PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743520.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 483aa MW: 54452.8 Da PI: 9.3856

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743520.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.2	5.2e-10	353	400	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++q+G g+W+ I r++ +Rt+ +++++w+++l XP_022743520.1 353 WTVSEVIKLVDGIAQYGVGRWTDIKRHLFassAHRTPVDLRDKWRNLL 400 **********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MKTDRKPHLI KKLADMKCQR VDESIVHGVG DEATEVEHLL AEPKSEHVSA NGVLCFGKEN 60 LEKHLKMEDF SCAFDYGWKI NCGGLDFIHG QGGDDLKLEV LDGLLDEVDE VDDIHAANDL 120 SGACEDFLLD IEFPEKFSEL DCSPHKGSNL RNSSSESRSP GFSGISNSAG GISESSIATV 180 QESNGKNGAL GKMFRCDCHH NFRNKCGCQA PVMGTIHPTI EHVQDFDESD DDEKPLVSFV 240 LSTKKVKSSV KVTKGGTLLR QKRLRKPTKR YIEEFSRNST TSGKNKRLKV KSQEELPQVP 300 SESRRQRGRP KKIVPKLELE SDCELSASEC EDERKRTKRT KTAFDRRKHQ RMWTVSEVIK 360 LVDGIAQYGV GRWTDIKRHL FASSAHRTPV DLRDKWRNLL RSSSAHKHSR RELQVETNLK 420 HAVRPLPKPV VCRIRELATI HPYPKVRSPK ISPVEYVPSS KQPTTKGASV YSHGRNLRRK 480 KCS

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MKTDRKPHLI KKLADMKCQR VDESIVHGVG DEATEVEHLL AEPKSEHVSA NGVLCFGKEN  60
LEKHLKMEDF SCAFDYGWKI NCGGLDFIHG QGGDDLKLEV LDGLLDEVDE VDDIHAANDL  120
SGACEDFLLD IEFPEKFSEL DCSPHKGSNL RNSSSESRSP GFSGISNSAG GISESSIATV  180
QESNGKNGAL GKMFRCDCHH NFRNKCGCQA PVMGTIHPTI EHVQDFDESD DDEKPLVSFV  240
LSTKKVKSSV KVTKGGTLLR QKRLRKPTKR YIEEFSRNST TSGKNKRLKV KSQEELPQVP  300
SESRRQRGRP KKIVPKLELE SDCELSASEC EDERKRTKRT KTAFDRRKHQ RMWTVSEVIK  360
LVDGIAQYGV GRWTDIKRHL FASSAHRTPV DLRDKWRNLL RSSSAHKHSR RELQVETNLK  420
HAVRPLPKPV VCRIRELATI HPYPKVRSPK ISPVEYVPSS KQPTTKGASV YSHGRNLRRK  480
KCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	2e-25	MYB_related family protein