PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743522.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 466aa MW: 52404.2 Da PI: 8.8115

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743522.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.2	4.9e-10	336	383	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++q+G g+W+ I r++ +Rt+ +++++w+++l XP_022743522.1 336 WTVSEVIKLVDGIAQYGVGRWTDIKRHLFassAHRTPVDLRDKWRNLL 383 **********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MNEVDESIVH GVGDEATEVE HLLAEPKSEH VSANGVLCFG KENLEKHLKM EDFSCAFDYG 60 WKINCGGLDF IHGQGGDDLK LEVLDGLLDE VDEVDDIHAA NDLSGACEDF LLDIEFPEKF 120 SELDCSPHKG SNLRNSSSES RSPGFSGISN SAGGISESSI ATVQESNGKN GALGKMFRCD 180 CHHNFRNKCG CQAPVMGTIH PTIEHVQDFD ESDDDEKPLV SFVLSTKKVK SSVKVTKGGT 240 LLRQKRLRKP TKRYIEEFSR NSTTSGKNKR LKVKSQEELP QVPSESRRQR GRPKKIVPKL 300 ELESDCELSA SECEDERKRT KRTKTAFDRR KHQRMWTVSE VIKLVDGIAQ YGVGRWTDIK 360 RHLFASSAHR TPVDLRDKWR NLLRSSSAHK HSRRELQVET NLKHAVRPLP KPVVCRIREL 420 ATIHPYPKVR SPKISPVEYV PSSKQPTTKG ASVYSHGRNL RRKKCS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MNEVDESIVH GVGDEATEVE HLLAEPKSEH VSANGVLCFG KENLEKHLKM EDFSCAFDYG  60
WKINCGGLDF IHGQGGDDLK LEVLDGLLDE VDEVDDIHAA NDLSGACEDF LLDIEFPEKF  120
SELDCSPHKG SNLRNSSSES RSPGFSGISN SAGGISESSI ATVQESNGKN GALGKMFRCD  180
CHHNFRNKCG CQAPVMGTIH PTIEHVQDFD ESDDDEKPLV SFVLSTKKVK SSVKVTKGGT  240
LLRQKRLRKP TKRYIEEFSR NSTTSGKNKR LKVKSQEELP QVPSESRRQR GRPKKIVPKL  300
ELESDCELSA SECEDERKRT KRTKTAFDRR KHQRMWTVSE VIKLVDGIAQ YGVGRWTDIK  360
RHLFASSAHR TPVDLRDKWR NLLRSSSAHK HSRRELQVET NLKHAVRPLP KPVVCRIREL  420
ATIHPYPKVR SPKISPVEYV PSSKQPTTKG ASVYSHGRNL RRKKCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	2e-25	MYB_related family protein