PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743610.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 358aa MW: 40217.6 Da PI: 7.7004

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.8e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +lvd+++++G g+W++ ++ g++R++k+c+ rw +yl XP_022743610.1 15 KGTWTPEEDRILVDYIQKHGHGSWRALPQLAGLNRCGKSCRYRWTTYL 62 799******************************************997 PP
2	Myb_DNA-binding	56.3	7.6e-18	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE++ +++++k lG++ W+tIa +++ gRt++++k++w++ XP_022743610.1 68 RGKFSEEEEQTIINLHKVLGNK-WSTIATHLP-GRTDNEIKNFWNT 111 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MMGRLPYHDG NGLKKGTWTP EEDRILVDYI QKHGHGSWRA LPQLAGLNRC GKSCRYRWTT 60 YLRPDIKRGK FSEEEEQTII NLHKVLGNKW STIATHLPGR TDNEIKNFWN TRLMKKLLQM 120 GIDPVTHRPR TDLNILANLP QLLAAANFSN LMNIPLDNAL RLQSDAAQLA KIQLLHNILQ 180 VLGTCSSSCT PPTMEAMNLI LAGPTFQENH QLYELLRINS RHEGNGNLPF GFATHELPQL 240 QSNILNIEAY QHQPQFSQYH QPMKVLKICS NNNVQFASSS SSSALPTSTP PLPALVPASP 300 ELPPTTVNQT ENKINPNDNP SFPSTTFEAL GNLMDDEASD SHWRDIIHQA SSQSWPIS

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MMGRLPYHDG NGLKKGTWTP EEDRILVDYI QKHGHGSWRA LPQLAGLNRC GKSCRYRWTT  60
YLRPDIKRGK FSEEEEQTII NLHKVLGNKW STIATHLPGR TDNEIKNFWN TRLMKKLLQM  120
GIDPVTHRPR TDLNILANLP QLLAAANFSN LMNIPLDNAL RLQSDAAQLA KIQLLHNILQ  180
VLGTCSSSCT PPTMEAMNLI LAGPTFQENH QLYELLRINS RHEGNGNLPF GFATHELPQL  240
QSNILNIEAY QHQPQFSQYH QPMKVLKICS NNNVQFASSS SSSALPTSTP PLPALVPASP  300
ELPPTTVNQT ENKINPNDNP SFPSTTFEAL GNLMDDEASD SHWRDIIHQA SSQSWPIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	3e-86	MYB family protein