PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743611.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 314aa    MW: 33418.2 Da    PI: 7.1091
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.64.3e-111154344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      W+ e d+ + +a + ++ +   +W++Ia++++ g+tl+++k+++
   XP_022743611.1 11 EWSREQDKAFENALATYPEDssdRWEKIAAEVP-GKTLEEIKEHY 54
                     7********************************.**********9 PP
2Myb_DNA-binding40.75.6e-13122166347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
   XP_022743611.1 122 AWTEDEHRLFLIGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 166
                      6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MTVDEAGSCS EWSREQDKAF ENALATYPED SSDRWEKIAA EVPGKTLEEI KEHYELLEDD  60
VNRIESGCVP LPPYNSSEGS AGHAGDEGTG KKGSGHLGHC NSESNHGSKN SRSDQERRKG  120
IAWTEDEHRL FLIGLDKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKDRRRS  180
SIHDITSVGN GDISAPQGPI TGQSNGAASG SSSGKSAKQP LQNPAAPPGV GMYGGPTIGQ  240
PIGGPLVSAV GTPVNLPAQA PMAYGVRAPV PGPVVPGASM NMGPVTYPMP HTSASRIIQV  300
WLHCVLSGSS KLIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-112MYB family protein