PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743683.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 193aa MW: 22681.7 Da PI: 9.4956

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743683.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.3	2.7e-18	31	84	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ ++ ++ql+ Le+ F+++ +++ +++ +L+++lgL+ rq+ vWFqNrRa++k XP_022743683.1 31 KKKRLRSDQLDSLERSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWK 84 5566899**********************************************9 PP
2	HD-ZIP_I/II	117.1	9.8e-38	30	121	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl ++q+ +LE+sF+ee kL+p+rK++l+reLglqprq+avWFqnrRAR+k+kqlE+ y++Lk++yd +++e+++L++ev +L+ l+ XP_022743683.1 30 EKKKRLRSDQLDSLERSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWKAKQLERLYDVLKQEYDVISREKQKLQDEVMKLKGMLR 121 69*************************************************************************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MEIKHPGLAE AAQGLVPALD KNIYNMNNQE KKKRLRSDQL DSLERSFQEE IKLDPDRKMK 60 LSRELGLQPR QIAVWFQNRR ARWKAKQLER LYDVLKQEYD VISREKQKLQ DEVMKLKGML 120 REQATTNQVS KGYTEISGEE TVESTSIRSS NKQRVVAHHH HQHQIAECNH LFNVEEYNPV 180 SSPYWGVQLP SYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	31	60	KKKRLRSDQLDSLERSFQEEIKLDPDRKMK
2	79	87	RRARWKAKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	7e-55	HD-ZIP family protein