PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743702.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 334aa MW: 36588.6 Da PI: 7.7587

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.5	5.3e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl XP_022743702.1 14 KGPWSPEEDAKLKEYIEKHGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.9	4.2e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed + +++ G++ W+ Ia +++ gRt++++k++w++ XP_022743702.1 69 GEFSDDEDRVICALFASIGSR-WSIIATHLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE KHGTGGNWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGE FSDDEDRVIC ALFASIGSRW SIIATHLPGR TDNDIKNYWN TRLKKKLFGT 120 VPQSQRIPHH IHHASFSSLL QSSSPSSPSP SSTILHNCRN NTSHPTARSF SGFEVSYSSS 180 FSNSSASCIT AASVLQPQES LLGPMQQYQL KDGLQMFGGE ASSSSSDGSC SNQINQGKEL 240 EHEYGGAPGS NGANNGDQQI GMHSYFYNEA NESQKLMASN GGGADGWSEK SSNGLFGETP 300 LDYGLEEIKQ LISTSSCNSF IFYESKAGEK VMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	5e-76	MYB family protein