PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743766.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 164aa    MW: 18246.9 Da    PI: 6.6535
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743766.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260142.51.3e-4461051100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+CakdC++apyfp+++p+kfa+vhk+FGasnv k+l++lp e+r da+sslvyeA+ar+rdPvyG+vg i+ lq+q++ql+ +la
  XP_022743766.1   6 PCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVGKMLQELPVEQRADAVSSLVYEANARIRDPVYGCVGAISYLQNQVSQLQMQLA 100
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022743766.1 101 VAQAE 105
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MGGNSPCASC KLLRRRCAKD CIFAPYFPSD DPHKFAIVHK VFGASNVGKM LQELPVEQRA  60
DAVSSLVYEA NARIRDPVYG CVGAISYLQN QVSQLQMQLA VAQAEILCIQ MQQEPMLPTP  120
QILDQVDDKS FLHNQYLNFA NSSTNVIHDH SLKRESIFGD MVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.17e-77LBD family protein