PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743826.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 439aa MW: 49088 Da PI: 6.3039

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743826.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39	1.4e-12	234	281	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er RR ++N++++ Lr+++P++ +K + a+++ A++YIk+L XP_022743826.1 234 TTKHFATERERRVHLNDKYHALRKMVPNP-----TKSDRASVVGDAIDYIKEL 281 579************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MQRRKRKTMV YEESGCFDPN STTDCQALIG LAAGSATTNS HNSLEDNLNL SSYNHDHQHE 60 DASAVAAALE MEIQQHYMFD NNTTNNNINN THFIPQLTQE LSYDQSNWDA DQQGFNMVPS 120 SSSPEAAYPP TPDLLNLFHL PRCSFLPNSS ISFENAPASS VVYDPLLHLN LPPQPPVFRE 180 LLQSLPHGYT LPADEREASG VGVLYHDGDN GILEFSGDIP MAGHGKGRNR AGKTTKHFAT 240 ERERRVHLND KYHALRKMVP NPTKSDRASV VGDAIDYIKE LLRTVRELKL LVEKKRCGQD 300 RCKKRKIEDA VSAVDAGDVE CKPLGDPEQC YNTSLRSSWL QRKSKDSEVD VRIIDDEVTI 360 KLVQKKKINC LLIVSRLLDE LQLDLHHVAG GNVGDYYSFL FNTKIYEGSS VYASSIANKL 420 IEVVDRQYAA APPTRSTCL

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MQRRKRKTMV YEESGCFDPN STTDCQALIG LAAGSATTNS HNSLEDNLNL SSYNHDHQHE  60
DASAVAAALE MEIQQHYMFD NNTTNNNINN THFIPQLTQE LSYDQSNWDA DQQGFNMVPS  120
SSSPEAAYPP TPDLLNLFHL PRCSFLPNSS ISFENAPASS VVYDPLLHLN LPPQPPVFRE  180
LLQSLPHGYT LPADEREASG VGVLYHDGDN GILEFSGDIP MAGHGKGRNR AGKTTKHFAT  240
ERERRVHLND KYHALRKMVP NPTKSDRASV VGDAIDYIKE LLRTVRELKL LVEKKRCGQD  300
RCKKRKIEDA VSAVDAGDVE CKPLGDPEQC YNTSLRSSWL QRKSKDSEVD VRIIDDEVTI  360
KLVQKKKINC LLIVSRLLDE LQLDLHHVAG GNVGDYYSFL FNTKIYEGSS VYASSIANKL  420
IEVVDRQYAA APPTRSTCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	4e-98	bHLH family protein