PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743839.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 362aa MW: 40349 Da PI: 4.8574

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743839.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.4	4.6e-15	77	115	6	46
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +eE++ +++++k lG++ W+tIa +++ gRt++++k++w++ XP_022743839.1 77 KEEEQTIINLHKVLGNK-WSTIATHLP-GRTDNEIKNFWNT 115 69*************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MEGEDSGDLQ SENTDIGHQS YYFRCTEDDK MEGEDNGDLQ SENTDIGHQS YYFRASDVAI 60 FKHTLPGLPK DTATEAKEEE QTIINLHKVL GNKWSTIATH LPGRTDNEIK NFWNTRLMKK 120 LLQMGIDPVT HRPRTDLNIL ANLPQLLAAA NFSNLMNIPL DNALRLQSDA AQLAKIQLLH 180 NILQVLGTCS SSCTPPTMEA MNLILVGPTF QENHQLYELL RINSRHEGNG NLPFGFATHE 240 LPQLQSNILN IEAYQHQPQF SQYHQPMKVL KICSNNNVQF ASSSSSSALP TSTPPIPALV 300 PASPELPPTT VNQTENKINP NDNPSFPSTT FEALGNLMDD EASDSHWRDI IHQASSQSWP 360 IS

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MEGEDSGDLQ SENTDIGHQS YYFRCTEDDK MEGEDNGDLQ SENTDIGHQS YYFRASDVAI  60
FKHTLPGLPK DTATEAKEEE QTIINLHKVL GNKWSTIATH LPGRTDNEIK NFWNTRLMKK  120
LLQMGIDPVT HRPRTDLNIL ANLPQLLAAA NFSNLMNIPL DNALRLQSDA AQLAKIQLLH  180
NILQVLGTCS SSCTPPTMEA MNLILVGPTF QENHQLYELL RINSRHEGNG NLPFGFATHE  240
LPQLQSNILN IEAYQHQPQF SQYHQPMKVL KICSNNNVQF ASSSSSSALP TSTPPIPALV  300
PASPELPPTT VNQTENKINP NDNPSFPSTT FEALGNLMDD EASDSHWRDI IHQASSQSWP  360
IS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	2e-43	MYB family protein