PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743989.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 339aa MW: 37842.1 Da PI: 10.1259

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.2	6.9e-16	52	135	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v L++a+++++ +r+klk+ +We+v++++ ++ ++++qCk+k+e+++kry+ + +++ + s++p++ +l+ XP_022743989.1 52 EWSEGAVSSLLDAYENKWVLRNRAKLKGFDWEDVARYVsaraNCTKSPKTQTQCKNKIESMKKRYRSESATADG------SSWPLYPRLD 135 5***********************************844444455556679**************99997......4699999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MDKETNQENP SLLSNNNNTI TRLEDCSPKK HPGSTAVIGG AGSGNDRLKR DEWSEGAVSS 60 LLDAYENKWV LRNRAKLKGF DWEDVARYVS ARANCTKSPK TQTQCKNKIE SMKKRYRSES 120 ATADGSSWPL YPRLDLLLRG SAPPPPPPPQ LHLSVPQAPV PLSTNPPLTL PEPSMVVMMQ 180 QQQPLSSLAP QLPGTAQNSH GSNGVERIAK EDEAGTKLSN PLSDKVGMET DSSTPALYSD 240 KEKQRLKKLK MKMEKRRRKK EKWEIAESIR WLAEVVLKSE QARMETIREI EKMRVEAEAK 300 RGEMDLKRTE IIANTQLEIA RLFAGSSKGV DSSLRIGRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	248	260	KLKMKMEKRRRKK
2	256	261	RRRKKE
3	256	262	RRRKKEK
4	257	263	RRRKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	1e-105	Trihelix family protein