PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022744101.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family Trihelix
Protein Properties Length: 533aa    MW: 61770.1 Da    PI: 7.8986
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022744101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix93.91.6e-29108193187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+++r  ++ +++++f+qlea
  XP_022744101.1 108 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMaEEHGYQRSGKKCREKFENLCKYYKKTKEGKSGR--QDGKNYRFFRQLEA 193
                     8*************************************999*****************************97..66678*******85 PP
2trihelix66.84.5e-21393480186
        trihelix   1 rWtkqevlaLiearremeerlrr..gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW+++e+  Li++r+++e r+++  g +k  lWee+ +km + g+er++++Ckekw+n+++++  +++ + k+++e+  +  yf ql+
  XP_022744101.1 393 RWSEHEISSLIRFRTSLEPRFQEttGYSKHRLWEEIEAKMVSLGYEREAVECKEKWDNMQMYFDMTNAERYKKRKEDFMSSNYFLQLD 480
                     8*********************83356*******************************************999999999999**9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    
MGDQYGFPDL LRFPARRTDF PATVPQPSEP YFAHRNMAPL APYHEAFMVS NGMAMPNGLV  60
RFDNDHFPGA SASSAITASA SGPCASLFGV EMENGGWSLG IIDSGNSRWP RQETLTLLEI  120
RSRLDSKFKE ANQKGPLWDE VSRIMAEEHG YQRSGKKCRE KFENLCKYYK KTKEGKSGRQ  180
DGKNYRFFRQ LEALYGETNN QSSVSETSLA QRTLLSRTSN NAMNQENHQE SMQKQKLSES  240
LCFSNASEFD TSSSENNDDG LSAIAFMMKQ STENKKSGSS SRVKKGWKTK VKDFVESQMK  300
KLIESQDVLM ERMLKTIEDK EQERMSKEEE WRRQETARFD KEHEFWVKKR AWFEARDAAL  360
MEVLKKFTGK GLEVSFSTEA PVTKNQDEMS TNRWSEHEIS SLIRFRTSLE PRFQETTGYS  420
KHRLWEEIEA KMVSLGYERE AVECKEKWDN MQMYFDMTNA ERYKKRKEDF MSSNYFLQLD  480
SFDVKPRINQ AMDSSASNSY DIINSFDIAV NQGDQRFWDR YGFKLSKGKN QQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.11e-106Trihelix family protein