PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022744142.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 407aa MW: 44325.1 Da PI: 8.3892

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022744142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	80	2.3e-25	147	190	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e XP_022744142.1 147 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVE 190 79***************************************997 PP
2	QLQ	53.6	6.5e-19	75	111	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ aQ+q+L+ Q+l+y+y++a++ vPpeLlq+i+k XP_022744142.1 75 SYFSLAQWQELELQALIYRYMLAGAAVPPELLQPIKK 111 79*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MDLHLKQWRN QHESEQQPSA KIPKHLDPHH QQQQQQLPPG SSSLPLFVPE LNSKICSSNL 60 SALPDSNTRF TGMASYFSLA QWQELELQAL IYRYMLAGAA VPPELLQPIK KSLPHSPTYF 120 LHYPLQHYSH YQPALLQSGY WGRAATDPEP GRCRRTDGKK WRCSRDVVAG QKYCERHVHR 180 GRNRSRKPVE MPTSSTTTSI TNNNATAPFG GASGTGVGAI GCGSLKASSP ITSPPLAAVA 240 NGPNNFGLSG PSPPIDLLHL NHSSSESKNE HRGLFEAHTE VDNRSDGHIL RHFFDDWPRS 300 LQESDNSGTN ASRMNSATCL SISIPGNSSS DVSLKLSTGN GDQLGSRDNE RDQPQLNWAA 360 GWASNHVASM GGPLAEALRS STSNSSPTSV LHQLPRGSAS ETSYVST

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MDLHLKQWRN QHESEQQPSA KIPKHLDPHH QQQQQQLPPG SSSLPLFVPE LNSKICSSNL  60
SALPDSNTRF TGMASYFSLA QWQELELQAL IYRYMLAGAA VPPELLQPIK KSLPHSPTYF  120
LHYPLQHYSH YQPALLQSGY WGRAATDPEP GRCRRTDGKK WRCSRDVVAG QKYCERHVHR  180
GRNRSRKPVE MPTSSTTTSI TNNNATAPFG GASGTGVGAI GCGSLKASSP ITSPPLAAVA  240
NGPNNFGLSG PSPPIDLLHL NHSSSESKNE HRGLFEAHTE VDNRSDGHIL RHFFDDWPRS  300
LQESDNSGTN ASRMNSATCL SISIPGNSSS DVSLKLSTGN GDQLGSRDNE RDQPQLNWAA  360
GWASNHVASM GGPLAEALRS STSNSSPTSV LHQLPRGSAS ETSYVST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	5e-79	GRF family protein