PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022744277.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 248aa MW: 28455.9 Da PI: 7.3723

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022744277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.5	4.1e-10	24	69	3	46
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT+eE +++ a + +G + +W ++a++++ g++ +++ +++ XP_022744277.1 24 YWTKEENKIFESALAIYGEDvpdRWIKVAAMIP-GKSVSDVIKHYRE 69 5******************************.*********96 PP
2	Myb_DNA-binding	38.9	2e-12	124	168	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + ++G+g+W+ I+r + +t+ q+ s+ qky XP_022744277.1 124 PWTEEEHRRFLMGLLKYGKGDWRNISRNFVISKTPTQVASHAQKY 168 8***************************789*********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
METLFATSFM LDLDWFDEES NSTYWTKEEN KIFESALAIY GEDVPDRWIK VAAMIPGKSV 60 SDVIKHYREL EEDVFDIEAG RVPIPGYLSS SFTLELVYNG DFDAYRKRPT AARGPDQERK 120 KGVPWTEEEH RRFLMGLLKY GKGDWRNISR NFVISKTPTQ VASHAQKYYQ RQLSGGNDKR 180 RPSIHDITTL NLTNTAFSGN HKPPSVNQSD VIALHQKLAS MHKVGRNWNH PNDGLAIAFN 240 STHWNSFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	4e-96	MYB family protein