PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022744815.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 647aa MW: 74215.7 Da PI: 7.577

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022744815.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.4e-09	462	503	2	40
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++WT+eE ell ++ +++++g +W+ I++++g+gR+ +++ XP_022744815.1 462 KPWTKEEIELLRKGMQKYPKGtsrRWEVISEYIGTGRSVEEI 503 69***********************************99876 PP
2	Myb_DNA-binding	27.2	9.3e-09	591	634	4	45
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W++ + lv+a k ++++ +W+++a+ ++ g+t +qck ++ XP_022744815.1 591 WSAVQERALVQALKTFPKEtsqRWERVAAAVP-GKTVNQCKKKFA 634 ******************************.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 647 aa Download sequence
MAVHTSIQLI SYSQELVEGQ PLYVSSNCLP VKALKYEPAG HAFHYAALKL LGCEEDDTSE 60 VDDQNVSNDK EQVYMPSSDS YSCKGKKKSA ADGKQQDHYA LLGLSHLRYL ATEDQIRRSY 120 REAALRHHPD KLAALLLAEE TEAAKQAKKD EIENHFKAIQ EAYEILIDPV KRRIYDSTDE 180 FDDEIPTECA PQDFFKVFGP AFMRNGRWSV TQPIPSLGDD SIPLKDVDNF YNFWYSFKSW 240 REFPHADEYD LEQAESRDHR RWMERQNAKL SEKARKEEYA RIRTLVDNAY KRDPRILRRK 300 EEEKAEKQRK KEAKLRAKQL QEEEAARAAE EERCRKEEEE KRAAEAALQH KKMKEKEKKL 360 LRKERTRLRT LSASVLSQHL FDLSEDDVES LCMTLGIEQL RSVCDKMENK EGLERAKIIR 420 DAHGYNVKVE EKKIDEMNSS QLNGSVESNG RVMLSSFEKK EKPWTKEEIE LLRKGMQKYP 480 KGTSRRWEVI SEYIGTGRSV EEILKATKTV LLQKPDATKA FDAFLEKRKP AQSIASPLST 540 REEVGGVSTP SGTENSAVKT VSPEDSVKSA SNPVDVVSGN EVSSSSEQEM WSAVQERALV 600 QALKTFPKET SQRWERVAAA VPGKTVNQCK KKFALLKENF RNKKNTV

Sequence ? help Back to Top

Protein Sequence Length: 647 aa Download sequence

MAVHTSIQLI SYSQELVEGQ PLYVSSNCLP VKALKYEPAG HAFHYAALKL LGCEEDDTSE  60
VDDQNVSNDK EQVYMPSSDS YSCKGKKKSA ADGKQQDHYA LLGLSHLRYL ATEDQIRRSY  120
REAALRHHPD KLAALLLAEE TEAAKQAKKD EIENHFKAIQ EAYEILIDPV KRRIYDSTDE  180
FDDEIPTECA PQDFFKVFGP AFMRNGRWSV TQPIPSLGDD SIPLKDVDNF YNFWYSFKSW  240
REFPHADEYD LEQAESRDHR RWMERQNAKL SEKARKEEYA RIRTLVDNAY KRDPRILRRK  300
EEEKAEKQRK KEAKLRAKQL QEEEAARAAE EERCRKEEEE KRAAEAALQH KKMKEKEKKL  360
LRKERTRLRT LSASVLSQHL FDLSEDDVES LCMTLGIEQL RSVCDKMENK EGLERAKIIR  420
DAHGYNVKVE EKKIDEMNSS QLNGSVESNG RVMLSSFEKK EKPWTKEEIE LLRKGMQKYP  480
KGTSRRWEVI SEYIGTGRSV EEILKATKTV LLQKPDATKA FDAFLEKRKP AQSIASPLST  540
REEVGGVSTP SGTENSAVKT VSPEDSVKSA SNPVDVVSGN EVSSSSEQEM WSAVQERALV  600
QALKTFPKET SQRWERVAAA VPGKTVNQCK KKFALLKENF RNKKNTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06110.1	0.0	MYB family protein