PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022744857.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GeBP

Protein Properties

Length: 418aa MW: 46059.8 Da PI: 4.5937

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022744857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	109.8	1.9e-34	120	222	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk.......spsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqk 87 lfqrlw++eDei lLqG++d+++++ + + d+ fy+++k+++++ ++k+qlveK+rrLKkK+++ ++k++sgk++sf+++hd+ XP_022744857.1 120 LFQRLWTDEDEIELLQGFLDYTNSKTNsnsssshH--HhyDTALFYDQIKSKLQLVFNKNQLVEKLRRLKKKYRNVMNKISSGKDFSFKSPHDHA 212 79*****************87766556654322..2359999*********************************************** PP DUF573 88 ifelskkiWg 97 +fe+s+kiW+ XP_022744857.1 213 TFEISRKIWN 222 *******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MASEQYDAVF EESQDDDEDP SSSDNDLDGN DDVLNDEEDE ELLEEEDINS PSFLPPPIAP 60 ALSSASIPAV PLAVPSATVV TVASVPTDES PPDSKRQRVD SAVTEKKPAP PQQLDESRRL 120 FQRLWTDEDE IELLQGFLDY TNSKTNSNSS SSHHHHYDTA LFYDQIKSKL QLVFNKNQLV 180 EKLRRLKKKY RNVMNKISSG KDFSFKSPHD HATFEISRKI WNSSVGKVED NVLDDDDNNN 240 NNNNNTYINL IDESGEKKNF TPKSTASKKR SRSKGGKMEV KRVLNDGFVV TNNNFNNRSN 300 NDNGNVEGFA GGRGGGGSVA GVVEEAVKSC LTPLFKELLG SVMGGGGGGR GISGLVMNAM 360 PLSFGGSLNF GFCGGNGELV DERWRKQQIM ELEVYARRLE LVQDQIKAAL EELRSMGG

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MASEQYDAVF EESQDDDEDP SSSDNDLDGN DDVLNDEEDE ELLEEEDINS PSFLPPPIAP  60
ALSSASIPAV PLAVPSATVV TVASVPTDES PPDSKRQRVD SAVTEKKPAP PQQLDESRRL  120
FQRLWTDEDE IELLQGFLDY TNSKTNSNSS SSHHHHYDTA LFYDQIKSKL QLVFNKNQLV  180
EKLRRLKKKY RNVMNKISSG KDFSFKSPHD HATFEISRKI WNSSVGKVED NVLDDDDNNN  240
NNNNNTYINL IDESGEKKNF TPKSTASKKR SRSKGGKMEV KRVLNDGFVV TNNNFNNRSN  300
NDNGNVEGFA GGRGGGGSVA GVVEEAVKSC LTPLFKELLG SVMGGGGGGR GISGLVMNAM  360
PLSFGGSLNF GFCGGNGELV DERWRKQQIM ELEVYARRLE LVQDQIKAAL EELRSMGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	311	317	GGRGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	1e-47	GeBP family protein