PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022744869.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 235aa MW: 27114 Da PI: 9.884

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022744869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.7	1.5e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA ELS+LCdaev +iifsstgkly+y+s XP_022744869.1 10 RIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLIIFSSTGKLYDYAS 59 8***********************************************86 PP
2	K-box	83.5	4.5e-28	81	171	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +++ + +q+e+a L+++++ Lq+ +R+l+Ge+L+ Ls+++Lq+Le+qLe slk +R kK+++l+++i+el +k + +++en +L kk++ XP_022744869.1 81 NPASEVKFWQKEAASLRQQLQHLQECHRQLMGEELSGLSVRDLQNLENQLEMSLKGVRIKKDQILTDKIKELNHKGHLIHQENLELYKKID 171 5678899*********************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MGRGKIAIRR IDNSTSRQVT FSKRRNGLLK KARELSILCD AEVGLIIFSS TGKLYDYASS 60 SMKRVIERYN KLKEEHHQLL NPASEVKFWQ KEAASLRQQL QHLQECHRQL MGEELSGLSV 120 RDLQNLENQL EMSLKGVRIK KDQILTDKIK ELNHKGHLIH QENLELYKKI DIIHQENTEL 180 QKKVYGTREA IESSRSSYSN CTFNDGYDLH APVHLQLSHP QPPKTDTLAK SMKLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14210.1	1e-100	MIKC_MADS family protein