PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745008.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 520aa MW: 59380.5 Da PI: 6.7675

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	74.9	1.3e-23	153	252	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt ++v++Li a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ ++ XP_022745008.1 153 KWTGSMVRLLIMAVYYIGDEAGSEGndptgkkkaggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQSL 247 7************99888875433677778999999******************************************559****** PP trihelix 82 fdqle 86 +d ++ XP_022745008.1 248 LDTMD 252 *9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MFCVSVKNSG KVKKVVANDI YLDRVFEISN NSCRSCFYYY SEWKLMVCLV GWFSGIGSGV 60 LGLEMPLHPQ QQPPQNPQSA QNPHHLHHHP QMVAFSHHET DHSQHQQPVK QGYTFSSKTK 120 QPSPLSDEDE PGFTPDDGTA DAKRKISPWQ RMKWTGSMVR LLIMAVYYIG DEAGSEGNDP 180 TGKKKAGGLL QKKGKWKSVS RAMMEKGFYV SPQQCEDKFN DLNKRYKRVN DILGKGTACR 240 VVENQSLLDT MDLSPKMKEE VRKLLNSKHL FFREMCAYHN SCGHGATAGP GGANHSPEVA 300 TETSQIQQQH SQQQRCLHSS DNAQIAGNWG RIETEASKLT KVGSEEEDDE EDDDSEDDEE 360 AMDGHSSGQN GHGQEDDEDN DEKSSLKRPR KGAFAMSLTP LMQQLSCEVV NLIQDGTKNA 420 WEKKHWMKMR LIQLEEQEVS YQYQAFELEK QRLKWVKFSS KKEREMEKAK LENERRRLEN 480 ERMMLLVRQK ELELIDLLQH HHQPQQHSSD KRGDPSSMTG

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MFCVSVKNSG KVKKVVANDI YLDRVFEISN NSCRSCFYYY SEWKLMVCLV GWFSGIGSGV  60
LGLEMPLHPQ QQPPQNPQSA QNPHHLHHHP QMVAFSHHET DHSQHQQPVK QGYTFSSKTK  120
QPSPLSDEDE PGFTPDDGTA DAKRKISPWQ RMKWTGSMVR LLIMAVYYIG DEAGSEGNDP  180
TGKKKAGGLL QKKGKWKSVS RAMMEKGFYV SPQQCEDKFN DLNKRYKRVN DILGKGTACR  240
VVENQSLLDT MDLSPKMKEE VRKLLNSKHL FFREMCAYHN SCGHGATAGP GGANHSPEVA  300
TETSQIQQQH SQQQRCLHSS DNAQIAGNWG RIETEASKLT KVGSEEEDDE EDDDSEDDEE  360
AMDGHSSGQN GHGQEDDEDN DEKSSLKRPR KGAFAMSLTP LMQQLSCEVV NLIQDGTKNA  420
WEKKHWMKMR LIQLEEQEVS YQYQAFELEK QRLKWVKFSS KKEREMEKAK LENERRRLEN  480
ERMMLLVRQK ELELIDLLQH HHQPQQHSSD KRGDPSSMTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	4e-73	Trihelix family protein