PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022745126.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 300aa    MW: 33470.3 Da    PI: 10.303
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022745126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.33.1e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G+g W+tI +          R+  ++k++w++
   XP_022745126.1  5 KQKWTPEEEAALKAGVIKHGPGKWRTILKDPEfsgvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGAPKQKWTP EEEAALKAGV IKHGPGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMSVMA  60
NGWGSRDKAR LAVKRTSSIP KQEESAMAHS VVPSDEEIVD VKPVSVSSTS VQIPTSTKRS  120
IVRLDNLIME AITSLKEPGG SNKTNITAYI EEQYWAPPDF KRLLSAKLKY LTACGRLIKV  180
KRRYRIVPAM SFSDRRRNHS LLFSQGRQRV SPRFDRDNFN ILTKSQIDLE LDRMRTMTPQ  240
EAAAAAARAV AEAEAAIEEA EEAAREAEVA EADAEAAQAF AEAAMKTLKG RNNQKVMVRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-107MYB_related family protein