PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022745168.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 411aa    MW: 45797.9 Da    PI: 8.966
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022745168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.14.4e-17338372135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C +  Tp+WR gp g+ktLCnaCG++y++ +l
  XP_022745168.1 338 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 372
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MAQFTPQGRL KLLFHGDGME SKDPFHYKLV SNVFGGSGGL KSLQVHNSTT RRLYFSYSLK  60
KGSKFNAKAC LNASNEGIYD EADYDSEFET DDLACFRGLV LDSSYRYCEA DENLTIDHVL  120
PVARGGEWKW ENLVAACAKC NSMKGQKTPD EANMKLIKVP KEVDMSLEWL SIFVEDCFSS  180
SGNYIPVGAA ANVQNKSTTA TKPTKSLEQK PQQTPPSLQK FSVPGKARSK RKRAATTLSK  240
TKMNPFSSWS NHLNSHNPNL QLACSDPPLL QQAYWLAESE LIVPKKEEDD CKNSSSNLMG  300
NSEVEQSKKE EMKKEKVVVS KESLGSEEGN SGQQPRRCTH CLAQRTPQWR AGPLGPKTLC  360
NACGVRYKSG RLLPEYRPAK SPTFVSYLHS NSHKKVMEMR MALLSSIPSE Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-39GATA family protein