PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745244.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 259aa MW: 28623.7 Da PI: 8.4033

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	91.8	8.2e-29	50	151	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C+++C+l++ + p++q++++ +v+k+FG++ ++++l ++p+++r+ +++sl++eA ra +Pv+Gavg++++++++++q+ XP_022745244.1 50 SCNGCRVLRKGCNENCMLRQSLqcidnPQAQAHATVFVAKFFGRASLMSFLYSVPQSQRPVLFQSLLFEAVGRAVNPVSGAVGLLWSGNWNVCQS 144 6********************99******************************************************************** PP DUF260 91 kaelall 97 +++ +l+ XP_022745244.1 145 AVQKVLQ 151 9987766 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MHFGSLYIFL CIPFPPKKTY FYIFLYSLPK LISSSSSFVF SYAERSLRMS CNGCRVLRKG 60 CNENCMLRQS LQCIDNPQAQ AHATVFVAKF FGRASLMSFL YSVPQSQRPV LFQSLLFEAV 120 GRAVNPVSGA VGLLWSGNWN VCQSAVQKVL QGGALEPLPE FSGRVSGSNF EDVSETVGGY 180 GQCFLTREED FKKRKGFGDG VKCQATDLDL CLMIGDDRAV KRTREATPSE ESETTTLGSR 240 SGDGSSSKGD EQKLLRLFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49940.1	2e-59	LBD family protein