PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745333.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 552aa MW: 60726.9 Da PI: 7.2746

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	5.9e-17	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l XP_022745333.1 59 KGGWTPEEDETLRNAVASFKGKSWKKIAEFFP-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	61.1	2.3e-19	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++++v ++G+ W+ Ia+ ++ gR +kqc++rw+++l XP_022745333.1 111 KGPWTQEEDDKIIELVSKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	53.5	5.3e-17	163	206	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l +a++ +G++ W+ Ia+ ++ gRt++ +k++w++ XP_022745333.1 163 KDAWTLEEELALMNAHRIYGNK-WAEIAKVLP-GRTDNAIKNHWNS 206 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MAELKIEESC LENKQLTTAS SSSVSEGGGI AVVKSPGISS PAPTSPNHRR TTGPIRRAKG 60 GWTPEEDETL RNAVASFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD 120 KIIELVSKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELALMNAHRI 180 YGNKWAEIAK VLPGRTDNAI KNHWNSSLKK KLDFYLATGK LPPFVKNGLQ NGTRDINTPS 240 ASKNLLVCSE KESDSTAQTS SGTTDICKPE EDGKDQLESS APVRYIAASS SVIPNESADT 300 ESAEGKTRSF DVNTCCCNSE SWAEFESHKI SAAIVEDKVV EKQVRHDTPI YGSLCYEPPR 360 LLGGTSLDSD NLNKKGMQHE WTFSPITSPV SFFTPPCVKG SGLSAHSPDS ILRIAAKSFP 420 NTPSIFRKRK TGAQSLTLPN KIGMNEDGIQ PSGEQERTEN SLEQAQCHDG SSCESPACQG 480 NSSIGPDCTA FNASPPYRLR SKKTSVFKSV ERQLEFTFDR ERHEDNPKSS DLSVNGSSPI 540 EDCSHATKMG IT

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MAELKIEESC LENKQLTTAS SSSVSEGGGI AVVKSPGISS PAPTSPNHRR TTGPIRRAKG  60
GWTPEEDETL RNAVASFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD  120
KIIELVSKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELALMNAHRI  180
YGNKWAEIAK VLPGRTDNAI KNHWNSSLKK KLDFYLATGK LPPFVKNGLQ NGTRDINTPS  240
ASKNLLVCSE KESDSTAQTS SGTTDICKPE EDGKDQLESS APVRYIAASS SVIPNESADT  300
ESAEGKTRSF DVNTCCCNSE SWAEFESHKI SAAIVEDKVV EKQVRHDTPI YGSLCYEPPR  360
LLGGTSLDSD NLNKKGMQHE WTFSPITSPV SFFTPPCVKG SGLSAHSPDS ILRIAAKSFP  420
NTPSIFRKRK TGAQSLTLPN KIGMNEDGIQ PSGEQERTEN SLEQAQCHDG SSCESPACQG  480
NSSIGPDCTA FNASPPYRLR SKKTSVFKSV ERQLEFTFDR ERHEDNPKSS DLSVNGSSPI  540
EDCSHATKMG IT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-174	MYB family protein