PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745411.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1145aa MW: 126900 Da PI: 9.3899

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.1	9.6e-09	45	80	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++ E e++++a +++G++ Wk++a+ + +R+ +++ XP_022745411.1 45 QWSKAEIERFYKAYREYGKD-WKKVAAAVR-NRSTEMV 80 6***************99.*****.98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1145 aa Download sequence
MAPTRKSKSV NKQYWSIYEV SPDKDVGNSR KSKPKKKLAD KLGSQWSKAE IERFYKAYRE 60 YGKDWKKVAA AVRNRSTEMV EALYSMNQAY LSLPDGIASV IGLTAMMTDH YSALGGSDGE 120 RESNEPSEIP QKVQKRKRAR VPLGSSKEGV VQPQSIVSSP GCLSLLKRAG LNGIPTHAVR 180 KRTPRVPVSC SNRRDDTESY IPPNKKVMKS EADGNDDEHV AALTLTLTLT GALQRGGSPD 240 VSQTPYKRAE CRRSSPIQSY DRMLPQLETT KAKFHDSSYE CRMEGRPGGT KPVSGTYARG 300 TGPLMDMEGV GSVEVHQKGK KFYRKKIKVE EIKSNLSDDG GEECSSTEEG IIGSALEGKD 360 DMEISSAKNE LSPWSQGKRS KKHVFGDESS SLDALLTLAN LSTSMLPTSI MASEDRITLE 420 ADDKFSVPEA ISISQSGDKT KHLGPNEKVL NLINGAEDAT SRKSKVGRYS ATDDNVVSDP 480 KQQPEPTNNT WKRKHKSLSS KDMAEEEKKY LSKGKCGTQS SVHSRQWKSF REPEDSPTNI 540 DPKMAGIDSV VSTSQVSAPN PVSLPTKPQS RRKMNLKRAL LSTDINSSKY TLKSQPNKHS 600 LSQDRLKEKL SSYLTSNLSR RWCSFEWFYS AIDYAWFAKR EFAEYLNHVG LGHIPRLTRV 660 EWGVIRSSLG KPRRFSECFL HEEREKLKKY RESVRQYYSQ LRIGSREGLA TDLAHPLSVG 720 QRVIAIHPKT REVNDGKVLT VDHDRCRVQF DSHELGVEFV TDIDCMPLNP LENMPETLRR 780 QNFAFDKFSV TPKESQGNGN LDFVGSVVFT SSGHLENATS PVNMLANPIK VDANRTILHT 840 NAAVSNVVTA HQAAHGKPLS MAHIRGREAD LRAMSELNCA LDRKEALLTE LRNTKNEILE 900 NQNGRSCLKV SEPFKNHIAT ASSALRNLGQ RNAYPANPLS TWQKLPTDPN FFGGWTSSVD 960 SSLVAPEAGS VVGEIVQGSR LKAHAMVDAA IKAVASKKEG EDAFMRIAEA LDSVDKKQFA 1020 SDIRMPVIKS QEQYNGCMDY HIHLVSSASK PTLTGWTPDP KLREASGRNE EQVPSELITA 1080 CVATLLMIQT CTERQFPPAY VAHIIDSAVT SLHPCCSPNL PVYQEIQTCM GKIKTQILAL 1140 IPTST

Sequence ? help Back to Top

Protein Sequence Length: 1145 aa Download sequence

MAPTRKSKSV NKQYWSIYEV SPDKDVGNSR KSKPKKKLAD KLGSQWSKAE IERFYKAYRE  60
YGKDWKKVAA AVRNRSTEMV EALYSMNQAY LSLPDGIASV IGLTAMMTDH YSALGGSDGE  120
RESNEPSEIP QKVQKRKRAR VPLGSSKEGV VQPQSIVSSP GCLSLLKRAG LNGIPTHAVR  180
KRTPRVPVSC SNRRDDTESY IPPNKKVMKS EADGNDDEHV AALTLTLTLT GALQRGGSPD  240
VSQTPYKRAE CRRSSPIQSY DRMLPQLETT KAKFHDSSYE CRMEGRPGGT KPVSGTYARG  300
TGPLMDMEGV GSVEVHQKGK KFYRKKIKVE EIKSNLSDDG GEECSSTEEG IIGSALEGKD  360
DMEISSAKNE LSPWSQGKRS KKHVFGDESS SLDALLTLAN LSTSMLPTSI MASEDRITLE  420
ADDKFSVPEA ISISQSGDKT KHLGPNEKVL NLINGAEDAT SRKSKVGRYS ATDDNVVSDP  480
KQQPEPTNNT WKRKHKSLSS KDMAEEEKKY LSKGKCGTQS SVHSRQWKSF REPEDSPTNI  540
DPKMAGIDSV VSTSQVSAPN PVSLPTKPQS RRKMNLKRAL LSTDINSSKY TLKSQPNKHS  600
LSQDRLKEKL SSYLTSNLSR RWCSFEWFYS AIDYAWFAKR EFAEYLNHVG LGHIPRLTRV  660
EWGVIRSSLG KPRRFSECFL HEEREKLKKY RESVRQYYSQ LRIGSREGLA TDLAHPLSVG  720
QRVIAIHPKT REVNDGKVLT VDHDRCRVQF DSHELGVEFV TDIDCMPLNP LENMPETLRR  780
QNFAFDKFSV TPKESQGNGN LDFVGSVVFT SSGHLENATS PVNMLANPIK VDANRTILHT  840
NAAVSNVVTA HQAAHGKPLS MAHIRGREAD LRAMSELNCA LDRKEALLTE LRNTKNEILE  900
NQNGRSCLKV SEPFKNHIAT ASSALRNLGQ RNAYPANPLS TWQKLPTDPN FFGGWTSSVD  960
SSLVAPEAGS VVGEIVQGSR LKAHAMVDAA IKAVASKKEG EDAFMRIAEA LDSVDKKQFA  1020
SDIRMPVIKS QEQYNGCMDY HIHLVSSASK PTLTGWTPDP KLREASGRNE EQVPSELITA  1080
CVATLLMIQT CTERQFPPAY VAHIIDSAVT SLHPCCSPNL PVYQEIQTCM GKIKTQILAL  1140
IPTST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein