PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745506.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-PHD

Protein Properties

Length: 979aa MW: 108514 Da PI: 5.3858

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	37.2	4.8e-12	896	937	11	52
HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 ++L + F++n+yp+++++e LAk+l++t +qV+ WF N R XP_022745506.1 896 VKQRLHSSFKENQYPDRATKESLAKELEMTFQQVSKWFENAR 937 6789************************************99 PP
2	PHD	34.5	4.7e-12	526	581	1	51
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ ++++++lCdg C+ fH++Cl+++l +e++p + wlC++C++k XP_022745506.1 526 FCAKCGSkdLSSNNDIILCDGaCDCGFHQYCLQPPLLKEDIPPDheGWLCPRCDCK 581 699*977667****66***************99999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 979 aa Download sequence
MYVHSSSRIA AEKSPSLSLS VCLLKTRDSI LLTDMIKVEH MGVSPSRAKS KKENHCCPEE 60 STSQQAHEFG SEYLHSELSE NKHRCGCAVT QNESAEIATC VSSSAIHEPS SEYVAKNSSP 120 EHLGLLPKGA SGHDHTDKSF YPQETVSGKT HKYCSQYVNK ETSENKNQPS SEIVQNELEE 180 ACTFVCGLPA KHLQPFSEDL SKNAITEGLG LPPDDSSKCN QTDKLSCPQL DSSEPTVDFG 240 SGNMRKKLCE PLEQRQELDS KGLPNGIEKS TTAVSSNVFN QILQLNPEDM NKSHCSRHLQ 300 SPPEGASSVI QTSKSSPVEP LRLLQEFAAG NPSIQQPSFH IEDMAKNSGA EQHEIMPKNL 360 LKNSGRCRDG KTSKRMKKKY MLRSLTSSDR ILRSKSQDKP KATESSNILA DVGSSEQQKR 420 RKRKKRKAKR EVADEYSRIR AHLRYLLNRM NYEQSLIAVY SAEGWKGLSL EKLKPEKELQ 480 RATSEILRLK LKIRDLFQRI DSLCAEGRLP ESLFDSEGQI DSEDIFCAKC GSKDLSSNND 540 IILCDGACDC GFHQYCLQPP LLKEDIPPDH EGWLCPRCDC KVDCIELVNE SQGTSFSLTD 600 SWEVFPEAAV AAGGQNQDPN FGLPSDDSDD NDYNPDSSET DEKDWGDESS SDESDFTSTS 660 EELEAPAKVN PYLELRSDDS EDDDYDPNGP DHDNAVKPES SSSDFTSDSE DLGAMLEDNI 720 SSQKEEGAVF INASRDSKRQ KPKLGGRESL NDELLSVMES ASEQDGAAAS KKRSIERLDY 780 KRLYDETYGS VSSSSSDDDY WNDATALRKR KKCAAEAASA AAANGNVSVS RSVSVSDGLK 840 LYPEGTEHKP RRKTRQKSNL KDTDLSPAEL QVGTSVSGSS GKKVGSSTYR RLGEAVKQRL 900 HSSFKENQYP DRATKESLAK ELEMTFQQVS KWFENARWSF NNSPSINETT AKKVSENDIT 960 SARPKKNCKM VTEKDKSKC

Sequence ? help Back to Top

Protein Sequence Length: 979 aa Download sequence

MYVHSSSRIA AEKSPSLSLS VCLLKTRDSI LLTDMIKVEH MGVSPSRAKS KKENHCCPEE  60
STSQQAHEFG SEYLHSELSE NKHRCGCAVT QNESAEIATC VSSSAIHEPS SEYVAKNSSP  120
EHLGLLPKGA SGHDHTDKSF YPQETVSGKT HKYCSQYVNK ETSENKNQPS SEIVQNELEE  180
ACTFVCGLPA KHLQPFSEDL SKNAITEGLG LPPDDSSKCN QTDKLSCPQL DSSEPTVDFG  240
SGNMRKKLCE PLEQRQELDS KGLPNGIEKS TTAVSSNVFN QILQLNPEDM NKSHCSRHLQ  300
SPPEGASSVI QTSKSSPVEP LRLLQEFAAG NPSIQQPSFH IEDMAKNSGA EQHEIMPKNL  360
LKNSGRCRDG KTSKRMKKKY MLRSLTSSDR ILRSKSQDKP KATESSNILA DVGSSEQQKR  420
RKRKKRKAKR EVADEYSRIR AHLRYLLNRM NYEQSLIAVY SAEGWKGLSL EKLKPEKELQ  480
RATSEILRLK LKIRDLFQRI DSLCAEGRLP ESLFDSEGQI DSEDIFCAKC GSKDLSSNND  540
IILCDGACDC GFHQYCLQPP LLKEDIPPDH EGWLCPRCDC KVDCIELVNE SQGTSFSLTD  600
SWEVFPEAAV AAGGQNQDPN FGLPSDDSDD NDYNPDSSET DEKDWGDESS SDESDFTSTS  660
EELEAPAKVN PYLELRSDDS EDDDYDPNGP DHDNAVKPES SSSDFTSDSE DLGAMLEDNI  720
SSQKEEGAVF INASRDSKRQ KPKLGGRESL NDELLSVMES ASEQDGAAAS KKRSIERLDY  780
KRLYDETYGS VSSSSSDDDY WNDATALRKR KKCAAEAASA AAANGNVSVS RSVSVSDGLK  840
LYPEGTEHKP RRKTRQKSNL KDTDLSPAEL QVGTSVSGSS GKKVGSSTYR RLGEAVKQRL  900
HSSFKENQYP DRATKESLAK ELEMTFQQVS KWFENARWSF NNSPSINETT AKKVSENDIT  960
SARPKKNCKM VTEKDKSKC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	417	425	QQKRRKRKK
2	418	427	QKRRKRKKRK
3	419	425	KRRKRKK
4	419	427	KRRKRKKRK
5	419	430	KRRKRKKRKAKR
6	420	426	KRRKRKK
7	421	427	KRRKRKK
8	421	425	RKRKK
9	422	430	KRRKRKKRK
10	808	812	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	4e-86	HB-PHD family protein