PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745645.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 1748aa MW: 191922 Da PI: 5.7872

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745645.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.1	9.5e-09	820	861	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++ d + +G++ +++Ia+ + ++t +c+++++k XP_022745645.1 820 PWTSEEKEIFMDKLAAFGKD-FRKIASFLD-HKTTADCVEFYYK 861 8***************99.*****.*********98 PP
2	Myb_DNA-binding	30.3	9.9e-10	1033	1072	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE +++av +G++ + I+r++g +R++ qck ++ XP_022745645.1 1033 WTDEEKSVFIQAVSSYGKD-FGMISRCVG-TRSRDQCKVFFS 1072 ***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1748 aa Download sequence
MPPEPLPWDR KDFYRERKLE RTESQPQLAS TARWRDSSSM SSYQHGSFRE FSRWGSADIR 60 RPPPGHGKQG NWHMFAEENG SYGYVPMRSG DKILDDESFH QSVSRGDGKY GRNSSRESNR 120 GSYSQRDWRG NSWETSNGSQ NTPGRPHDVN NERKSVDDML TYPSHTHSDF INTWDQLQKD 180 QHDNKTNGVN GLSTVQRCER ENSVGSMDWK PLKWSRSGSL SSRGSGFSHS SSSKSLGGVD 240 SGEGKPNLQQ KNLTPVQSPS GDAAACVTSA VPFDETTSRK KPRLRWGEGL AKYEKKKVEG 300 PDTSMNRFGA TIPVGNTEPN NSLSSNLADK SPRVLGFSDC ASPATPSSVA CSSSPGMEEK 360 SFGKAANVEN DGNNLCGSPS LGSQNHLEGS PFNLEKLDSN SIINMGPSLI DLLQSDDPST 420 VDSSFVRSTA INKLLLLKGD VLKALEINES EIDSLENELK SLKGDSGSRC QCPATSSSLP 480 VEENGKACQE LEAVSNMIPR PAPLKIDPCG DALEEKLPLC NGVLEEINAD IKDGDIDSPG 540 TATSKFVEPS SLEKAVSPSD IVKFHECSGN LGTIQLTAME EVILATGSRN EGTVAPISGE 600 VSVLKKIDND DAHVPESSNS YADGENIIYD EILTINKELA NGASKVFNNL LPEYQYSVEI 660 SENANAAYWQ TDASIREKIA MRKRYLRFKE RVLTLKFKAF QHAWKEDMRS LSMRKYRAKS 720 QKKYEFSFRS THGGYQKHRS SFRSRVTSPA RSLILEPNAE MINFASKLFL DSNVRLYRNA 780 LKMPALFLDE KEKQISRFIS SNGLVEDPCA VEKERVLINP WTSEEKEIFM DKLAAFGKDF 840 RKIASFLDHK TTADCVEFYY KNHKSECFEK TKKKLDTSKQ GKSSVNTYLL TSGKKWSREL 900 NAASLDVLGA ASVIAAHAES GMQNRQTSSG RIFLGGRFDS KASRADVSIA ERSGCFDIIG 960 NDQETVAADV LAGICGSLSS EAMSSCITSS ADPGWKCHKV DSMVKRPSTS VTQNVDDDTC 1020 SDESCGEMDP ADWTDEEKSV FIQAVSSYGK DFGMISRCVG TRSRDQCKVF FSKARKCLGL 1080 DLIRPRTRNM GTAVNDDANG GGSDMEDAFV LESSVVCSDK LGSKAEDLPS TIVSMNVDEY 1140 DQTGEVSLQS DLNLSEENNG RLVDYRDSET VEARAFYVGQ TELISEGVGD DMVVDSNKAE 1200 SVHVKKSVSL ANLNALRNHV AEQGVSVAVS ASLGEAVDPC LPRLDAVVEP KPDAGCPTEG 1260 FGNDLEAQET SLSKHGLDER NTNCIAETSS RSICGVDSNK TSDEFIDKNS SSGFSFNTKD 1320 PHQASLDLDS AEKPSVIILP KENSFTKNSP LHDSDAFQCK KICNQDRLSS TLDYNENEDK 1380 QAHKSVSRDE SDHLSGKPLV DLAESYQIIR GNPLQISTLK EMNGDVNSQL PLLKSLSTSE 1440 RGFTGPYLAQ DCYLQKCNGS RSAADLPLPV ENLEQVNGRP KSHSRSLSDT EKPCRNGNFK 1500 LFGQILNSGS QDDEKVSHFP KQSTKSLNLK FTGHNNVGGN TSCSKYDRNN CHRSEIVPKR 1560 SYGFWDGNRI QTGLSSLPDS SILMAKYPAA FVNYPVSASQ MNQQALQTVV RTTDRNLNGD 1620 VSVFPPRETS SNNGVVDYQM YRGRDRTRVA PFTMDMKQPP EMFSEMQRRN GFDATPNLQP 1680 QGRGGMVGMN VVGRGGVLVG GSCPTLSDPV AVLRMQYAKT TEQYGGQSGS INREEESWRG 1740 KGDIGSSR

Sequence ? help Back to Top

Protein Sequence Length: 1748 aa Download sequence

MPPEPLPWDR KDFYRERKLE RTESQPQLAS TARWRDSSSM SSYQHGSFRE FSRWGSADIR  60
RPPPGHGKQG NWHMFAEENG SYGYVPMRSG DKILDDESFH QSVSRGDGKY GRNSSRESNR  120
GSYSQRDWRG NSWETSNGSQ NTPGRPHDVN NERKSVDDML TYPSHTHSDF INTWDQLQKD  180
QHDNKTNGVN GLSTVQRCER ENSVGSMDWK PLKWSRSGSL SSRGSGFSHS SSSKSLGGVD  240
SGEGKPNLQQ KNLTPVQSPS GDAAACVTSA VPFDETTSRK KPRLRWGEGL AKYEKKKVEG  300
PDTSMNRFGA TIPVGNTEPN NSLSSNLADK SPRVLGFSDC ASPATPSSVA CSSSPGMEEK  360
SFGKAANVEN DGNNLCGSPS LGSQNHLEGS PFNLEKLDSN SIINMGPSLI DLLQSDDPST  420
VDSSFVRSTA INKLLLLKGD VLKALEINES EIDSLENELK SLKGDSGSRC QCPATSSSLP  480
VEENGKACQE LEAVSNMIPR PAPLKIDPCG DALEEKLPLC NGVLEEINAD IKDGDIDSPG  540
TATSKFVEPS SLEKAVSPSD IVKFHECSGN LGTIQLTAME EVILATGSRN EGTVAPISGE  600
VSVLKKIDND DAHVPESSNS YADGENIIYD EILTINKELA NGASKVFNNL LPEYQYSVEI  660
SENANAAYWQ TDASIREKIA MRKRYLRFKE RVLTLKFKAF QHAWKEDMRS LSMRKYRAKS  720
QKKYEFSFRS THGGYQKHRS SFRSRVTSPA RSLILEPNAE MINFASKLFL DSNVRLYRNA  780
LKMPALFLDE KEKQISRFIS SNGLVEDPCA VEKERVLINP WTSEEKEIFM DKLAAFGKDF  840
RKIASFLDHK TTADCVEFYY KNHKSECFEK TKKKLDTSKQ GKSSVNTYLL TSGKKWSREL  900
NAASLDVLGA ASVIAAHAES GMQNRQTSSG RIFLGGRFDS KASRADVSIA ERSGCFDIIG  960
NDQETVAADV LAGICGSLSS EAMSSCITSS ADPGWKCHKV DSMVKRPSTS VTQNVDDDTC  1020
SDESCGEMDP ADWTDEEKSV FIQAVSSYGK DFGMISRCVG TRSRDQCKVF FSKARKCLGL  1080
DLIRPRTRNM GTAVNDDANG GGSDMEDAFV LESSVVCSDK LGSKAEDLPS TIVSMNVDEY  1140
DQTGEVSLQS DLNLSEENNG RLVDYRDSET VEARAFYVGQ TELISEGVGD DMVVDSNKAE  1200
SVHVKKSVSL ANLNALRNHV AEQGVSVAVS ASLGEAVDPC LPRLDAVVEP KPDAGCPTEG  1260
FGNDLEAQET SLSKHGLDER NTNCIAETSS RSICGVDSNK TSDEFIDKNS SSGFSFNTKD  1320
PHQASLDLDS AEKPSVIILP KENSFTKNSP LHDSDAFQCK KICNQDRLSS TLDYNENEDK  1380
QAHKSVSRDE SDHLSGKPLV DLAESYQIIR GNPLQISTLK EMNGDVNSQL PLLKSLSTSE  1440
RGFTGPYLAQ DCYLQKCNGS RSAADLPLPV ENLEQVNGRP KSHSRSLSDT EKPCRNGNFK  1500
LFGQILNSGS QDDEKVSHFP KQSTKSLNLK FTGHNNVGGN TSCSKYDRNN CHRSEIVPKR  1560
SYGFWDGNRI QTGLSSLPDS SILMAKYPAA FVNYPVSASQ MNQQALQTVV RTTDRNLNGD  1620
VSVFPPRETS SNNGVVDYQM YRGRDRTRVA PFTMDMKQPP EMFSEMQRRN GFDATPNLQP  1680
QGRGGMVGMN VVGRGGVLVG GSCPTLSDPV AVLRMQYAKT TEQYGGQSGS INREEESWRG  1740
KGDIGSSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	279	297	RKKPRLRWGEGLAKYEKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein