PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745646.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 1699aa MW: 185800 Da PI: 5.4005

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	9.2e-09	771	812	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++ d + +G++ +++Ia+ + ++t +c+++++k XP_022745646.1 771 PWTSEEKEIFMDKLAAFGKD-FRKIASFLD-HKTTADCVEFYYK 812 8***************99.*****.*********98 PP
2	Myb_DNA-binding	30.3	9.6e-10	984	1023	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE +++av +G++ + I+r++g +R++ qck ++ XP_022745646.1 984 WTDEEKSVFIQAVSSYGKD-FGMISRCVG-TRSRDQCKVFFS 1023 ***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1699 aa Download sequence
MGPSENSLVG DPLISVVLLQ GNWHMFAEEN GSYGYVPMRS GDKILDDESF HQSVSRGDGK 60 YGRNSSRESN RGSYSQRDWR GNSWETSNGS QNTPGRPHDV NNERKSVDDM LTYPSHTHSD 120 FINTWDQLQK DQHDNKTNGV NGLSTVQRCE RENSVGSMDW KPLKWSRSGS LSSRGSGFSH 180 SSSSKSLGGV DSGEGKPNLQ QKNLTPVQSP SGDAAACVTS AVPFDETTSR KKPRLRWGEG 240 LAKYEKKKVE GPDTSMNRFG ATIPVGNTEP NNSLSSNLAD KSPRVLGFSD CASPATPSSV 300 ACSSSPGMEE KSFGKAANVE NDGNNLCGSP SLGSQNHLEG SPFNLEKLDS NSIINMGPSL 360 IDLLQSDDPS TVDSSFVRST AINKLLLLKG DVLKALEINE SEIDSLENEL KSLKGDSGSR 420 CQCPATSSSL PVEENGKACQ ELEAVSNMIP RPAPLKIDPC GDALEEKLPL CNGVLEEINA 480 DIKDGDIDSP GTATSKFVEP SSLEKAVSPS DIVKFHECSG NLGTIQLTAM EEVILATGSR 540 NEGTVAPISG EVSVLKKIDN DDAHVPESSN SYADGENIIY DEILTINKEL ANGASKVFNN 600 LLPEYQYSVE ISENANAAYW QTDASIREKI AMRKRYLRFK ERVLTLKFKA FQHAWKEDMR 660 SLSMRKYRAK SQKKYEFSFR STHGGYQKHR SSFRSRVTSP ARSLILEPNA EMINFASKLF 720 LDSNVRLYRN ALKMPALFLD EKEKQISRFI SSNGLVEDPC AVEKERVLIN PWTSEEKEIF 780 MDKLAAFGKD FRKIASFLDH KTTADCVEFY YKNHKSECFE KTKKKLDTSK QGKSSVNTYL 840 LTSGKKWSRE LNAASLDVLG AASVIAAHAE SGMQNRQTSS GRIFLGGRFD SKASRADVSI 900 AERSGCFDII GNDQETVAAD VLAGICGSLS SEAMSSCITS SADPGWKCHK VDSMVKRPST 960 SVTQNVDDDT CSDESCGEMD PADWTDEEKS VFIQAVSSYG KDFGMISRCV GTRSRDQCKV 1020 FFSKARKCLG LDLIRPRTRN MGTAVNDDAN GGGSDMEDAF VLESSVVCSD KLGSKAEDLP 1080 STIVSMNVDE YDQTGEVSLQ SDLNLSEENN GRLVDYRDSE TVEARAFYVG QTELISEGVG 1140 DDMVVDSNKA ESVHVKKSVS LANLNALRNH VAEQGVSVAV SASLGEAVDP CLPRLDAVVE 1200 PKPDAGCPTE GFGNDLEAQE TSLSKHGLDE RNTNCIAETS SRSICGVDSN KTSDEFIDKN 1260 SSSGFSFNTK DPHQASLDLD SAEKPSVIIL PKENSFTKNS PLHDSDAFQC KKICNQDRLS 1320 STLDYNENED KQAHKSVSRD ESDHLSGKPL VDLAESYQII RGNPLQISTL KEMNGDVNSQ 1380 LPLLKSLSTS ERGFTGPYLA QDCYLQKCNG SRSAADLPLP VENLEQVNGR PKSHSRSLSD 1440 TEKPCRNGNF KLFGQILNSG SQDDEKVSHF PKQSTKSLNL KFTGHNNVGG NTSCSKYDRN 1500 NCHRSEIVPK RSYGFWDGNR IQTGLSSLPD SSILMAKYPA AFVNYPVSAS QMNQQALQTV 1560 VRTTDRNLNG DVSVFPPRET SSNNGVVDYQ MYRGRDRTRV APFTMDMKQP PEMFSEMQRR 1620 NGFDATPNLQ PQGRGGMVGM NVVGRGGVLV GGSCPTLSDP VAVLRMQYAK TTEQYGGQSG 1680 SINREEESWR GKGDIGSSR

Sequence ? help Back to Top

Protein Sequence Length: 1699 aa Download sequence

MGPSENSLVG DPLISVVLLQ GNWHMFAEEN GSYGYVPMRS GDKILDDESF HQSVSRGDGK  60
YGRNSSRESN RGSYSQRDWR GNSWETSNGS QNTPGRPHDV NNERKSVDDM LTYPSHTHSD  120
FINTWDQLQK DQHDNKTNGV NGLSTVQRCE RENSVGSMDW KPLKWSRSGS LSSRGSGFSH  180
SSSSKSLGGV DSGEGKPNLQ QKNLTPVQSP SGDAAACVTS AVPFDETTSR KKPRLRWGEG  240
LAKYEKKKVE GPDTSMNRFG ATIPVGNTEP NNSLSSNLAD KSPRVLGFSD CASPATPSSV  300
ACSSSPGMEE KSFGKAANVE NDGNNLCGSP SLGSQNHLEG SPFNLEKLDS NSIINMGPSL  360
IDLLQSDDPS TVDSSFVRST AINKLLLLKG DVLKALEINE SEIDSLENEL KSLKGDSGSR  420
CQCPATSSSL PVEENGKACQ ELEAVSNMIP RPAPLKIDPC GDALEEKLPL CNGVLEEINA  480
DIKDGDIDSP GTATSKFVEP SSLEKAVSPS DIVKFHECSG NLGTIQLTAM EEVILATGSR  540
NEGTVAPISG EVSVLKKIDN DDAHVPESSN SYADGENIIY DEILTINKEL ANGASKVFNN  600
LLPEYQYSVE ISENANAAYW QTDASIREKI AMRKRYLRFK ERVLTLKFKA FQHAWKEDMR  660
SLSMRKYRAK SQKKYEFSFR STHGGYQKHR SSFRSRVTSP ARSLILEPNA EMINFASKLF  720
LDSNVRLYRN ALKMPALFLD EKEKQISRFI SSNGLVEDPC AVEKERVLIN PWTSEEKEIF  780
MDKLAAFGKD FRKIASFLDH KTTADCVEFY YKNHKSECFE KTKKKLDTSK QGKSSVNTYL  840
LTSGKKWSRE LNAASLDVLG AASVIAAHAE SGMQNRQTSS GRIFLGGRFD SKASRADVSI  900
AERSGCFDII GNDQETVAAD VLAGICGSLS SEAMSSCITS SADPGWKCHK VDSMVKRPST  960
SVTQNVDDDT CSDESCGEMD PADWTDEEKS VFIQAVSSYG KDFGMISRCV GTRSRDQCKV  1020
FFSKARKCLG LDLIRPRTRN MGTAVNDDAN GGGSDMEDAF VLESSVVCSD KLGSKAEDLP  1080
STIVSMNVDE YDQTGEVSLQ SDLNLSEENN GRLVDYRDSE TVEARAFYVG QTELISEGVG  1140
DDMVVDSNKA ESVHVKKSVS LANLNALRNH VAEQGVSVAV SASLGEAVDP CLPRLDAVVE  1200
PKPDAGCPTE GFGNDLEAQE TSLSKHGLDE RNTNCIAETS SRSICGVDSN KTSDEFIDKN  1260
SSSGFSFNTK DPHQASLDLD SAEKPSVIIL PKENSFTKNS PLHDSDAFQC KKICNQDRLS  1320
STLDYNENED KQAHKSVSRD ESDHLSGKPL VDLAESYQII RGNPLQISTL KEMNGDVNSQ  1380
LPLLKSLSTS ERGFTGPYLA QDCYLQKCNG SRSAADLPLP VENLEQVNGR PKSHSRSLSD  1440
TEKPCRNGNF KLFGQILNSG SQDDEKVSHF PKQSTKSLNL KFTGHNNVGG NTSCSKYDRN  1500
NCHRSEIVPK RSYGFWDGNR IQTGLSSLPD SSILMAKYPA AFVNYPVSAS QMNQQALQTV  1560
VRTTDRNLNG DVSVFPPRET SSNNGVVDYQ MYRGRDRTRV APFTMDMKQP PEMFSEMQRR  1620
NGFDATPNLQ PQGRGGMVGM NVVGRGGVLV GGSCPTLSDP VAVLRMQYAK TTEQYGGQSG  1680
SINREEESWR GKGDIGSSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	248	RKKPRLRWGEGLAKYEKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein