PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745648.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 1675aa MW: 183255 Da PI: 5.4428

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745648.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	9.1e-09	747	788	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++ d + +G++ +++Ia+ + ++t +c+++++k XP_022745648.1 747 PWTSEEKEIFMDKLAAFGKD-FRKIASFLD-HKTTADCVEFYYK 788 8***************99.*****.*********98 PP
2	Myb_DNA-binding	30.3	9.4e-10	960	999	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE +++av +G++ + I+r++g +R++ qck ++ XP_022745648.1 960 WTDEEKSVFIQAVSSYGKD-FGMISRCVG-TRSRDQCKVFFS 999 ***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1675 aa Download sequence
MFAEENGSYG YVPMRSGDKI LDDESFHQSV SRGDGKYGRN SSRESNRGSY SQRDWRGNSW 60 ETSNGSQNTP GRPHDVNNER KSVDDMLTYP SHTHSDFINT WDQLQKDQHD NKTNGVNGLS 120 TVQRCERENS VGSMDWKPLK WSRSGSLSSR GSGFSHSSSS KSLGGVDSGE GKPNLQQKNL 180 TPVQSPSGDA AACVTSAVPF DETTSRKKPR LRWGEGLAKY EKKKVEGPDT SMNRFGATIP 240 VGNTEPNNSL SSNLADKSPR VLGFSDCASP ATPSSVACSS SPGMEEKSFG KAANVENDGN 300 NLCGSPSLGS QNHLEGSPFN LEKLDSNSII NMGPSLIDLL QSDDPSTVDS SFVRSTAINK 360 LLLLKGDVLK ALEINESEID SLENELKSLK GDSGSRCQCP ATSSSLPVEE NGKACQELEA 420 VSNMIPRPAP LKIDPCGDAL EEKLPLCNGV LEEINADIKD GDIDSPGTAT SKFVEPSSLE 480 KAVSPSDIVK FHECSGNLGT IQLTAMEEVI LATGSRNEGT VAPISGEVSV LKKIDNDDAH 540 VPESSNSYAD GENIIYDEIL TINKELANGA SKVFNNLLPE YQYSVEISEN ANAAYWQTDA 600 SIREKIAMRK RYLRFKERVL TLKFKAFQHA WKEDMRSLSM RKYRAKSQKK YEFSFRSTHG 660 GYQKHRSSFR SRVTSPARSL ILEPNAEMIN FASKLFLDSN VRLYRNALKM PALFLDEKEK 720 QISRFISSNG LVEDPCAVEK ERVLINPWTS EEKEIFMDKL AAFGKDFRKI ASFLDHKTTA 780 DCVEFYYKNH KSECFEKTKK KLDTSKQGKS SVNTYLLTSG KKWSRELNAA SLDVLGAASV 840 IAAHAESGMQ NRQTSSGRIF LGGRFDSKAS RADVSIAERS GCFDIIGNDQ ETVAADVLAG 900 ICGSLSSEAM SSCITSSADP GWKCHKVDSM VKRPSTSVTQ NVDDDTCSDE SCGEMDPADW 960 TDEEKSVFIQ AVSSYGKDFG MISRCVGTRS RDQCKVFFSK ARKCLGLDLI RPRTRNMGTA 1020 VNDDANGGGS DMEDAFVLES SVVCSDKLGS KAEDLPSTIV SMNVDEYDQT GEVSLQSDLN 1080 LSEENNGRLV DYRDSETVEA RAFYVGQTEL ISEGVGDDMV VDSNKAESVH VKKSVSLANL 1140 NALRNHVAEQ GVSVAVSASL GEAVDPCLPR LDAVVEPKPD AGCPTEGFGN DLEAQETSLS 1200 KHGLDERNTN CIAETSSRSI CGVDSNKTSD EFIDKNSSSG FSFNTKDPHQ ASLDLDSAEK 1260 PSVIILPKEN SFTKNSPLHD SDAFQCKKIC NQDRLSSTLD YNENEDKQAH KSVSRDESDH 1320 LSGKPLVDLA ESYQIIRGNP LQISTLKEMN GDVNSQLPLL KSLSTSERGF TGPYLAQDCY 1380 LQKCNGSRSA ADLPLPVENL EQVNGRPKSH SRSLSDTEKP CRNGNFKLFG QILNSGSQDD 1440 EKVSHFPKQS TKSLNLKFTG HNNVGGNTSC SKYDRNNCHR SEIVPKRSYG FWDGNRIQTG 1500 LSSLPDSSIL MAKYPAAFVN YPVSASQMNQ QALQTVVRTT DRNLNGDVSV FPPRETSSNN 1560 GVVDYQMYRG RDRTRVAPFT MDMKQPPEMF SEMQRRNGFD ATPNLQPQGR GGMVGMNVVG 1620 RGGVLVGGSC PTLSDPVAVL RMQYAKTTEQ YGGQSGSINR EEESWRGKGD IGSSR

Sequence ? help Back to Top

Protein Sequence Length: 1675 aa Download sequence

MFAEENGSYG YVPMRSGDKI LDDESFHQSV SRGDGKYGRN SSRESNRGSY SQRDWRGNSW  60
ETSNGSQNTP GRPHDVNNER KSVDDMLTYP SHTHSDFINT WDQLQKDQHD NKTNGVNGLS  120
TVQRCERENS VGSMDWKPLK WSRSGSLSSR GSGFSHSSSS KSLGGVDSGE GKPNLQQKNL  180
TPVQSPSGDA AACVTSAVPF DETTSRKKPR LRWGEGLAKY EKKKVEGPDT SMNRFGATIP  240
VGNTEPNNSL SSNLADKSPR VLGFSDCASP ATPSSVACSS SPGMEEKSFG KAANVENDGN  300
NLCGSPSLGS QNHLEGSPFN LEKLDSNSII NMGPSLIDLL QSDDPSTVDS SFVRSTAINK  360
LLLLKGDVLK ALEINESEID SLENELKSLK GDSGSRCQCP ATSSSLPVEE NGKACQELEA  420
VSNMIPRPAP LKIDPCGDAL EEKLPLCNGV LEEINADIKD GDIDSPGTAT SKFVEPSSLE  480
KAVSPSDIVK FHECSGNLGT IQLTAMEEVI LATGSRNEGT VAPISGEVSV LKKIDNDDAH  540
VPESSNSYAD GENIIYDEIL TINKELANGA SKVFNNLLPE YQYSVEISEN ANAAYWQTDA  600
SIREKIAMRK RYLRFKERVL TLKFKAFQHA WKEDMRSLSM RKYRAKSQKK YEFSFRSTHG  660
GYQKHRSSFR SRVTSPARSL ILEPNAEMIN FASKLFLDSN VRLYRNALKM PALFLDEKEK  720
QISRFISSNG LVEDPCAVEK ERVLINPWTS EEKEIFMDKL AAFGKDFRKI ASFLDHKTTA  780
DCVEFYYKNH KSECFEKTKK KLDTSKQGKS SVNTYLLTSG KKWSRELNAA SLDVLGAASV  840
IAAHAESGMQ NRQTSSGRIF LGGRFDSKAS RADVSIAERS GCFDIIGNDQ ETVAADVLAG  900
ICGSLSSEAM SSCITSSADP GWKCHKVDSM VKRPSTSVTQ NVDDDTCSDE SCGEMDPADW  960
TDEEKSVFIQ AVSSYGKDFG MISRCVGTRS RDQCKVFFSK ARKCLGLDLI RPRTRNMGTA  1020
VNDDANGGGS DMEDAFVLES SVVCSDKLGS KAEDLPSTIV SMNVDEYDQT GEVSLQSDLN  1080
LSEENNGRLV DYRDSETVEA RAFYVGQTEL ISEGVGDDMV VDSNKAESVH VKKSVSLANL  1140
NALRNHVAEQ GVSVAVSASL GEAVDPCLPR LDAVVEPKPD AGCPTEGFGN DLEAQETSLS  1200
KHGLDERNTN CIAETSSRSI CGVDSNKTSD EFIDKNSSSG FSFNTKDPHQ ASLDLDSAEK  1260
PSVIILPKEN SFTKNSPLHD SDAFQCKKIC NQDRLSSTLD YNENEDKQAH KSVSRDESDH  1320
LSGKPLVDLA ESYQIIRGNP LQISTLKEMN GDVNSQLPLL KSLSTSERGF TGPYLAQDCY  1380
LQKCNGSRSA ADLPLPVENL EQVNGRPKSH SRSLSDTEKP CRNGNFKLFG QILNSGSQDD  1440
EKVSHFPKQS TKSLNLKFTG HNNVGGNTSC SKYDRNNCHR SEIVPKRSYG FWDGNRIQTG  1500
LSSLPDSSIL MAKYPAAFVN YPVSASQMNQ QALQTVVRTT DRNLNGDVSV FPPRETSSNN  1560
GVVDYQMYRG RDRTRVAPFT MDMKQPPEMF SEMQRRNGFD ATPNLQPQGR GGMVGMNVVG  1620
RGGVLVGGSC PTLSDPVAVL RMQYAKTTEQ YGGQSGSINR EEESWRGKGD IGSSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	224	RKKPRLRWGEGLAKYEKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	0.0	MYB family protein