PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745649.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 1457aa MW: 160274 Da PI: 5.2541

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.4	7.8e-09	529	570	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++ d + +G++ +++Ia+ + ++t +c+++++k XP_022745649.1 529 PWTSEEKEIFMDKLAAFGKD-FRKIASFLD-HKTTADCVEFYYK 570 8***************99.*****.*********98 PP
2	Myb_DNA-binding	30.6	8.1e-10	742	781	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE +++av +G++ + I+r++g +R++ qck ++ XP_022745649.1 742 WTDEEKSVFIQAVSSYGKD-FGMISRCVG-TRSRDQCKVFFS 781 ***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1457 aa Download sequence
MPPEPLPWDR KDFYRERKLE RTESQPQLAS TARWRDSSSM SSYQHGSFRE FSRWGSADIR 60 RPPPGMEEKS FGKAANVEND GNNLCGSPSL GSQNHLEGSP FNLEKLDSNS IINMGPSLID 120 LLQSDDPSTV DSSFVRSTAI NKLLLLKGDV LKALEINESE IDSLENELKS LKGDSGSRCQ 180 CPATSSSLPV EENGKACQEL EAVSNMIPRP APLKIDPCGD ALEEKLPLCN GVLEEINADI 240 KDGDIDSPGT ATSKFVEPSS LEKAVSPSDI VKFHECSGNL GTIQLTAMEE VILATGSRNE 300 GTVAPISGEV SVLKKIDNDD AHVPESSNSY ADGENIIYDE ILTINKELAN GASKVFNNLL 360 PEYQYSVEIS ENANAAYWQT DASIREKIAM RKRYLRFKER VLTLKFKAFQ HAWKEDMRSL 420 SMRKYRAKSQ KKYEFSFRST HGGYQKHRSS FRSRVTSPAR SLILEPNAEM INFASKLFLD 480 SNVRLYRNAL KMPALFLDEK EKQISRFISS NGLVEDPCAV EKERVLINPW TSEEKEIFMD 540 KLAAFGKDFR KIASFLDHKT TADCVEFYYK NHKSECFEKT KKKLDTSKQG KSSVNTYLLT 600 SGKKWSRELN AASLDVLGAA SVIAAHAESG MQNRQTSSGR IFLGGRFDSK ASRADVSIAE 660 RSGCFDIIGN DQETVAADVL AGICGSLSSE AMSSCITSSA DPGWKCHKVD SMVKRPSTSV 720 TQNVDDDTCS DESCGEMDPA DWTDEEKSVF IQAVSSYGKD FGMISRCVGT RSRDQCKVFF 780 SKARKCLGLD LIRPRTRNMG TAVNDDANGG GSDMEDAFVL ESSVVCSDKL GSKAEDLPST 840 IVSMNVDEYD QTGEVSLQSD LNLSEENNGR LVDYRDSETV EARAFYVGQT ELISEGVGDD 900 MVVDSNKAES VHVKKSVSLA NLNALRNHVA EQGVSVAVSA SLGEAVDPCL PRLDAVVEPK 960 PDAGCPTEGF GNDLEAQETS LSKHGLDERN TNCIAETSSR SICGVDSNKT SDEFIDKNSS 1020 SGFSFNTKDP HQASLDLDSA EKPSVIILPK ENSFTKNSPL HDSDAFQCKK ICNQDRLSST 1080 LDYNENEDKQ AHKSVSRDES DHLSGKPLVD LAESYQIIRG NPLQISTLKE MNGDVNSQLP 1140 LLKSLSTSER GFTGPYLAQD CYLQKCNGSR SAADLPLPVE NLEQVNGRPK SHSRSLSDTE 1200 KPCRNGNFKL FGQILNSGSQ DDEKVSHFPK QSTKSLNLKF TGHNNVGGNT SCSKYDRNNC 1260 HRSEIVPKRS YGFWDGNRIQ TGLSSLPDSS ILMAKYPAAF VNYPVSASQM NQQALQTVVR 1320 TTDRNLNGDV SVFPPRETSS NNGVVDYQMY RGRDRTRVAP FTMDMKQPPE MFSEMQRRNG 1380 FDATPNLQPQ GRGGMVGMNV VGRGGVLVGG SCPTLSDPVA VLRMQYAKTT EQYGGQSGSI 1440 NREEESWRGK GDIGSSR

Sequence ? help Back to Top

Protein Sequence Length: 1457 aa Download sequence

MPPEPLPWDR KDFYRERKLE RTESQPQLAS TARWRDSSSM SSYQHGSFRE FSRWGSADIR  60
RPPPGMEEKS FGKAANVEND GNNLCGSPSL GSQNHLEGSP FNLEKLDSNS IINMGPSLID  120
LLQSDDPSTV DSSFVRSTAI NKLLLLKGDV LKALEINESE IDSLENELKS LKGDSGSRCQ  180
CPATSSSLPV EENGKACQEL EAVSNMIPRP APLKIDPCGD ALEEKLPLCN GVLEEINADI  240
KDGDIDSPGT ATSKFVEPSS LEKAVSPSDI VKFHECSGNL GTIQLTAMEE VILATGSRNE  300
GTVAPISGEV SVLKKIDNDD AHVPESSNSY ADGENIIYDE ILTINKELAN GASKVFNNLL  360
PEYQYSVEIS ENANAAYWQT DASIREKIAM RKRYLRFKER VLTLKFKAFQ HAWKEDMRSL  420
SMRKYRAKSQ KKYEFSFRST HGGYQKHRSS FRSRVTSPAR SLILEPNAEM INFASKLFLD  480
SNVRLYRNAL KMPALFLDEK EKQISRFISS NGLVEDPCAV EKERVLINPW TSEEKEIFMD  540
KLAAFGKDFR KIASFLDHKT TADCVEFYYK NHKSECFEKT KKKLDTSKQG KSSVNTYLLT  600
SGKKWSRELN AASLDVLGAA SVIAAHAESG MQNRQTSSGR IFLGGRFDSK ASRADVSIAE  660
RSGCFDIIGN DQETVAADVL AGICGSLSSE AMSSCITSSA DPGWKCHKVD SMVKRPSTSV  720
TQNVDDDTCS DESCGEMDPA DWTDEEKSVF IQAVSSYGKD FGMISRCVGT RSRDQCKVFF  780
SKARKCLGLD LIRPRTRNMG TAVNDDANGG GSDMEDAFVL ESSVVCSDKL GSKAEDLPST  840
IVSMNVDEYD QTGEVSLQSD LNLSEENNGR LVDYRDSETV EARAFYVGQT ELISEGVGDD  900
MVVDSNKAES VHVKKSVSLA NLNALRNHVA EQGVSVAVSA SLGEAVDPCL PRLDAVVEPK  960
PDAGCPTEGF GNDLEAQETS LSKHGLDERN TNCIAETSSR SICGVDSNKT SDEFIDKNSS  1020
SGFSFNTKDP HQASLDLDSA EKPSVIILPK ENSFTKNSPL HDSDAFQCKK ICNQDRLSST  1080
LDYNENEDKQ AHKSVSRDES DHLSGKPLVD LAESYQIIRG NPLQISTLKE MNGDVNSQLP  1140
LLKSLSTSER GFTGPYLAQD CYLQKCNGSR SAADLPLPVE NLEQVNGRPK SHSRSLSDTE  1200
KPCRNGNFKL FGQILNSGSQ DDEKVSHFPK QSTKSLNLKF TGHNNVGGNT SCSKYDRNNC  1260
HRSEIVPKRS YGFWDGNRIQ TGLSSLPDSS ILMAKYPAAF VNYPVSASQM NQQALQTVVR  1320
TTDRNLNGDV SVFPPRETSS NNGVVDYQMY RGRDRTRVAP FTMDMKQPPE MFSEMQRRNG  1380
FDATPNLQPQ GRGGMVGMNV VGRGGVLVGG SCPTLSDPVA VLRMQYAKTT EQYGGQSGSI  1440
NREEESWRGK GDIGSSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-179	MYB family protein