PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745791.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 961aa MW: 108241 Da PI: 5.1417

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	9.6e-14	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_022745791.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.8	1.6e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_022745791.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 961 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACARD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDTRRR KRKRKGIDYN AEIPFEKRPP PGFYDVADED RTVEQPKFPT 240 TIEELEGKRR VDIEAQLRKQ DIAKNKIAQR QDAPSAILQS NKLNDPETVR KRSKLMLPEP 300 QISNHELEEI AKMGYASDLL AGNEELAEGS GATRALLANY SQTPRQGMTP LRTPQRTPSG 360 KGDAIMMEAE NLARLRESQT PLLGGENPEL HPSDFSGVTP KSQIQTPNPM TPLATPGGAG 420 FTPRTGMTPS RDGYSYGMTP KGTPIRDELH INEDMDLHDS AKLEQRRQID LRRNLRSGLS 480 SLPQPKNEYQ IVIQPPPEDN EEPEEKIEED MSDRIARERA EEEVRQQALL KKRSKVLQRE 540 LPRPPSSSLE LIRDSLMRTD GDKSSFVPPT SIEQADEMIR KELLSLLEHD NAKYPLDEKA 600 NKGKKKGSKR PANGSIPSIE DFEEDEMKEA DSLIKEEAEF LCVAMGHENE SLDDFMEAHN 660 TCLNDLMYFP TRNAYGLSSV AGNMEKLVAL QAEFDNVKKK MDNDKLKAES MEKKFNVLTQ 720 GYERRAATLW RQIESTFKQM DPAGTELECF QALQKQERLA ASHRINGLWE EVQKQKELEQ 780 TLQRRYGNLT AELERIQNLT NVYRVQAQKL EEAAEKDRAL ELSEAAASQA AVPISGLSEP 840 TPSSEHVDSS LDGQPSLKVD MNVDSGKEPA SMDMETDGGI SGNVPLVVED KGDNTTKTLN 900 GMTGDASSEV AAESTNPDSF STKQESIQEK LEGEGFTDHT KANNSSVLGG DTAEKQTGME 960 E

Sequence ? help Back to Top

Protein Sequence Length: 961 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACARD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDTRRR KRKRKGIDYN AEIPFEKRPP PGFYDVADED RTVEQPKFPT  240
TIEELEGKRR VDIEAQLRKQ DIAKNKIAQR QDAPSAILQS NKLNDPETVR KRSKLMLPEP  300
QISNHELEEI AKMGYASDLL AGNEELAEGS GATRALLANY SQTPRQGMTP LRTPQRTPSG  360
KGDAIMMEAE NLARLRESQT PLLGGENPEL HPSDFSGVTP KSQIQTPNPM TPLATPGGAG  420
FTPRTGMTPS RDGYSYGMTP KGTPIRDELH INEDMDLHDS AKLEQRRQID LRRNLRSGLS  480
SLPQPKNEYQ IVIQPPPEDN EEPEEKIEED MSDRIARERA EEEVRQQALL KKRSKVLQRE  540
LPRPPSSSLE LIRDSLMRTD GDKSSFVPPT SIEQADEMIR KELLSLLEHD NAKYPLDEKA  600
NKGKKKGSKR PANGSIPSIE DFEEDEMKEA DSLIKEEAEF LCVAMGHENE SLDDFMEAHN  660
TCLNDLMYFP TRNAYGLSSV AGNMEKLVAL QAEFDNVKKK MDNDKLKAES MEKKFNVLTQ  720
GYERRAATLW RQIESTFKQM DPAGTELECF QALQKQERLA ASHRINGLWE EVQKQKELEQ  780
TLQRRYGNLT AELERIQNLT NVYRVQAQKL EEAAEKDRAL ELSEAAASQA AVPISGLSEP  840
TPSSEHVDSS LDGQPSLKVD MNVDSGKEPA SMDMETDGGI SGNVPLVVED KGDNTTKTLN  900
GMTGDASSEV AAESTNPDSF STKQESIQEK LEGEGFTDHT KANNSSVLGG DTAEKQTGME  960
E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KRRELKAAGIDTRRRKRKRK
2	198	204	RRRKRKR
3	199	204	RRKRKR
4	199	205	RRKRKRK
5	199	205	RRRKRKR
6	200	205	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein