PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022745979.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 402aa    MW: 45000.4 Da    PI: 6.6092
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022745979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.47.7e-09272319448
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      WT  E  +lvd+++q+G g+W+ I r +      Rt+ +++++w+++l
   XP_022745979.1 272 WTLAEVIKLVDGIAQYGVGRWTDIKRLLFassAYRTPVDLRDKWRNLL 319
                      ********************************99************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MKTDRKQHLI KKLCNMKRQR VDQSIVPGLE DEATEVAHLL AEPKSEHVSR DGVLCFGKDN  60
LEKHLKMEDF SCAFDYGWKI NYGGLDSIHG QGGDDLKLEV LDGLLDEVDE VDDIHAAHDI  120
SGACEDFLLD IEFPEKHSVL DCGPREGSTL RNSSSESHSP GFSGSSNSAG GISESSIPTV  180
QESNSKNGVL GNMVSCDLHR NFRSKYGCQG PVLDTIRPTI EDVQDLDVSD DDEEPLELES  240
DCEFSASESE DQHKRTKRSK TACDRRKHQT MWTLAEVIKL VDGIAQYGVG RWTDIKRLLF  300
ASSAYRTPVD LRDKWRNLLR SSSAHGHNRR ELQVQNNVKH AVRPLPKPVV RRIRELATIH  360
PYPRVRSSKI SSVDYVPSSK QPTTKVAPVY SPARNLRGKN CC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.11e-23MYB_related family protein