PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022745980.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB_related
Protein Properties Length: 359aa    MW: 40127.1 Da    PI: 7.596
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022745980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.76.5e-09229276448
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      WT  E  +lvd+++q+G g+W+ I r +      Rt+ +++++w+++l
   XP_022745980.1 229 WTLAEVIKLVDGIAQYGVGRWTDIKRLLFassAYRTPVDLRDKWRNLL 276
                      ********************************99************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MKTDRKQHLI KKLCNMKRQR VDQSIVPGLE DEATEVAHLL AEPKSEHVSR DGVLCFGKDN  60
LEKHLKMEDF SCAFDYGWKI NYGGLDSIHG QGGDDLKLEV LDGLLDEVDE VDDIHAAHDI  120
SGACEDFLLD IEFPEKHSVL DCGPREGSTL RNSSSESHSP GFSGSSNSAG GISESSIPTV  180
QESNSKNGVL GNMELESDCE FSASESEDQH KRTKRSKTAC DRRKHQTMWT LAEVIKLVDG  240
IAQYGVGRWT DIKRLLFASS AYRTPVDLRD KWRNLLRSSS AHGHNRRELQ VQNNVKHAVR  300
PLPKPVVRRI RELATIHPYP RVRSSKISSV DYVPSSKQPT TKVAPVYSPA RNLRGKNCC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.27e-24MYB_related family protein