PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022746194.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 299aa    MW: 34331.4 Da    PI: 9.6404
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022746194.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.12.4e-094185446
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     WT+eE +++  a + +G +   +W ++a++++ g+t  +++  ++ 
   XP_022746194.1 41 WTKEENKRFESALAIYGEDvpdRWMKVAAMIP-GKTVLDVIKQYRE 85
                     ********************************.*******999986 PP
2Myb_DNA-binding43.47.6e-14140184347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ +  ++G+g+W+ I+r +  ++t+ q+ s+ qky
   XP_022746194.1 140 PWTEEEHRRFLMGLMKYGKGDWRNISRNFVVTKTPTQVASHAQKY 184
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MLLKKRLILD SQNLSSMETL HATSFMSNLD WFDQESNNTY WTKEENKRFE SALAIYGEDV  60
PDRWMKVAAM IPGKTVLDVI KQYRELEEDV FDIEAGRVPI PGYLRSSFTL ELVDNRDFDA  120
YRKRSTGARG HDQERKKGVP WTEEEHRRFL MGLMKYGKGD WRNISRNFVV TKTPTQVASH  180
AQKYYQRQLS GGKDKRRPSI HDITTVNLTN TGFSDNHKPP SVNQSTVLAL QQKLASMQKV  240
SQNWNHPNDG SALAFNSTHG NWFTSSQYQT ASNGMRLQEQ NLYGSAYHGA HITPQSSVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05790.13e-98MYB family protein