PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746382.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 314aa MW: 35983.8 Da PI: 6.2448

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	81.9	6.6e-26	128	189	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqKe+ +s++prsY+rCt + gC+++k+v+r ++d ++ ++tY g+H+++ XP_022746382.1 128 MEDGHAWRKYGQKEILNSKHPRSYFRCTRKydqGCRATKQVQRMEDDSQMYQTTYIGTHTCR 189 58************************998899***********************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MGSVSPWPER LSSNKTRVIQ QLIHGQECAT QLQILFHKSF EEGARLSAQE LVQKILRSFN 60 ETLSVLSCCD SAEISQNQAT SNDDSPCCDD RRSEDSSESR KRPASKDRRG CYKRKRSALT 120 WTLVSTTMED GHAWRKYGQK EILNSKHPRS YFRCTRKYDQ GCRATKQVQR MEDDSQMYQT 180 TYIGTHTCRD SFKAPQIIKD SESWESYMVT SGDSETPSKQ QHHHLNPPTT PTVKQETKEE 240 TTPSDLTDLD SIKWKDIMSG GFEYSSEPVG MGSDYGDGVC NVYSTKITSR NFKLDFENDF 300 HFDESEFVYE SSLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	116	RKRPASKDRRGCYKRKR
2	113	140	KRKRSALTWTLVSTTMEDGHAWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	9e-46	WRKY family protein