PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746412.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 397aa MW: 43897.2 Da PI: 5.1401

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5e-18	50	95	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l+++v ++G ++W++Iar + gR++k+c++rw + XP_022746412.1 50 KGPWSPEEDAILIELVSKFGARNWSLIARGIA-GRSGKSCRLRWCNQ 95 79****************************.*********985 PP
2	Myb_DNA-binding	55.4	1.4e-17	102	146	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd+ ++ a++ +G++ W+ Iar ++ gRt++ +k++w++ XP_022746412.1 102 RKPFTDEEDQTIISAHAVHGNK-WAVIARLLP-GRTDNAIKNHWNST 146 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
METETEAVEN GNDTTVTEIN VQSPAALDGG DEVSRDDLAV GERRRKERVK GPWSPEEDAI 60 LIELVSKFGA RNWSLIARGI AGRSGKSCRL RWCNQLDPAV KRKPFTDEED QTIISAHAVH 120 GNKWAVIARL LPGRTDNAIK NHWNSTLRRQ YMELGRVKSK SENMVEDASL DKTKASSEET 180 LSCAEDSSFR SLEGKDISSL EKLDDQLKDK DLTGIQSSHE SIEPPTLFRP VARISAFNVY 240 NNVDAPEFVS PRSRPVPMLG TPIQTSKPDV GICKLLEGVF TERLVPLQCG HGCCGTQNGR 300 NLNNSLLGPE FVEFSEPPSF PSYELAAIAT DISNLAWLKS GLDNNSIKAM DDAADGTAFH 360 RSQVSVGHFE EGRMDDHLRI EEKNKKLMST MTNLLST

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

METETEAVEN GNDTTVTEIN VQSPAALDGG DEVSRDDLAV GERRRKERVK GPWSPEEDAI  60
LIELVSKFGA RNWSLIARGI AGRSGKSCRL RWCNQLDPAV KRKPFTDEED QTIISAHAVH  120
GNKWAVIARL LPGRTDNAIK NHWNSTLRRQ YMELGRVKSK SENMVEDASL DKTKASSEET  180
LSCAEDSSFR SLEGKDISSL EKLDDQLKDK DLTGIQSSHE SIEPPTLFRP VARISAFNVY  240
NNVDAPEFVS PRSRPVPMLG TPIQTSKPDV GICKLLEGVF TERLVPLQCG HGCCGTQNGR  300
NLNNSLLGPE FVEFSEPPSF PSYELAAIAT DISNLAWLKS GLDNNSIKAM DDAADGTAFH  360
RSQVSVGHFE EGRMDDHLRI EEKNKKLMST MTNLLST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-110	MYB family protein