PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746477.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 338aa MW: 37959.1 Da PI: 8.3796

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746477.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.7	8.2e-16	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEdell+ ++++ G g+W+t +++ g+ R++k+c++rw +yl XP_022746477.1 33 RGPWMPEEDELLASYINKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 80 89****************************99**********97 PP
2	Myb_DNA-binding	41.9	2.3e-13	91	145	6	48
HHHHHHHHHHHHHTTTT.............-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg.............tWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ +W++Ia +++ gRt++++k++w+++l XP_022746477.1 91 ADEEDLILRLHRLLGNRwstlnqfngfvpgRWSLIAGRIP-GRTDNEIKNYWNTHL 145 79************************************.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MRNPATANTT TTTTTRNNNG SKTPCCSKVG LKRGPWMPEE DELLASYINK EGEGRWRTLP 60 KRAGLLRCGK SCRLRWMNYL RPTVKRGQIA ADEEDLILRL HRLLGNRWST LNQFNGFVPG 120 RWSLIAGRIP GRTDNEIKNY WNTHLSKKLI SQGIDPRTHK PLKPQQSPSD LKASSSSRAN 180 RRPAAIPKPN NPASSNLEET SSDQIMADKE NANFQNHYDQ TDDIAIGHGF TSLINCDGSG 240 MEMRSSNQNH GISNEEDENI NYCTDDVFSS FLNSLINEDA FTNQNQMQQH QQINGISQAD 300 AVVSITATTF SLGQGWESPI MSTNFNQNDT KRVNDHLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	9e-80	MYB family protein