PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746478.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 324aa MW: 36354.3 Da PI: 8.1483

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	7.7e-16	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEdell+ ++++ G g+W+t +++ g+ R++k+c++rw +yl XP_022746478.1 33 RGPWMPEEDELLASYINKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 80 89****************************99**********97 PP
2	Myb_DNA-binding	46.2	1.1e-14	91	131	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_022746478.1 91 ADEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 131 79*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MRNPATANTT TTTTTRNNNG SKTPCCSKVG LKRGPWMPEE DELLASYINK EGEGRWRTLP 60 KRAGLLRCGK SCRLRWMNYL RPTVKRGQIA ADEEDLILRL HRLLGNRWSL IAGRIPGRTD 120 NEIKNYWNTH LSKKLISQGI DPRTHKPLKP QQSPSDLKAS SSSRANRRPA AIPKPNNPAS 180 SNLEETSSDQ IMADKENANF QNHYDQTDDI AIGHGFTSLI NCDGSGMEMR SSNQNHGISN 240 EEDENINYCT DDVFSSFLNS LINEDAFTNQ NQMQQHQQIN GISQADAVVS ITATTFSLGQ 300 GWESPIMSTN FNQNDTKRVN DHLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	5e-84	MYB family protein