PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746493.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 686aa MW: 75577.2 Da PI: 7.0548

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.4	2.7e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g++W++++iyr++++r++lt+GW++Fv+ ++L +gD++vF + + XP_022746493.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldykAEPPVQ--TILAKDVHGEVWRFRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSIVFL--RAE 211 89**************************985444444..8999*****************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_022746493.1 212 NGDLCVGILRA 222 8889**996 PP
2	Auxin_resp	113.6	1.8e-37	282	365	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa++a+++++FevvY+Prast+eF+vk+++v++a+++++ +GmRfkmafetedss++++ +Gt++ + +dp+rWpnS Wr+L+ XP_022746493.1 282 AATRAANRQPFEVVYYPRASTPEFCVKASSVRAAMQIQWYPGMRFKMAFETEDSSRISWfMGTISTAQVVDPIRWPNSLWRLLQ 365 78999*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MITIMDSRKE LIKNSEKCLD PQLWHACAGG MVQMPSVNSK VFYFAQGHAE HANGNVNFGS 60 LLIPSLILCQ ISAIKFMADP ETDEVYAKIM LVPLRENDFG HEDDGYDGNI GMESPEKPAS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYKAEPPVQT ILAKDVHGEV WRFRHIYRGT 180 PRRHLLTTGW SNFVNHKKLV AGDSIVFLRA ENGDLCVGIL RAKRGIGSGY EYPSGWNSGG 240 GSCGSHFGGY TPFLREEESK LMRKDSDGNL RRRVTAESVI EAATRAANRQ PFEVVYYPRA 300 STPEFCVKAS SVRAAMQIQW YPGMRFKMAF ETEDSSRISW FMGTISTAQV VDPIRWPNSL 360 WRLLQVAWDE PDLLHNVKRI SPWLVELVTN MPAIHLNPFS PPRKKMRLPQ DSDFSSLGQI 420 PMPSFSGNSF RSSSPVCCIT DNIPGGIQGA RHAPFGLSSS DLPSNKLHSG LFPLGFHQLD 480 HTAPPARLSS DNLFSDNGNN RSISSLLTTG NPTLSLKESN EIKTPHILLF GQPIFSEQQG 540 SQSCSGDTVG NSSSDGNTEK TAISSDGSGS ALHQSARENP SDEGSPWFKE HKKTDLGLEI 600 GHCKVFTESE NVGRTLDLSV LGSYKELYGK LANMFGIESS KMLSSVLYRD AAGSVKHTGD 660 EPFSEFLKTA RRLTILMDSG SDNIGR

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MITIMDSRKE LIKNSEKCLD PQLWHACAGG MVQMPSVNSK VFYFAQGHAE HANGNVNFGS  60
LLIPSLILCQ ISAIKFMADP ETDEVYAKIM LVPLRENDFG HEDDGYDGNI GMESPEKPAS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYKAEPPVQT ILAKDVHGEV WRFRHIYRGT  180
PRRHLLTTGW SNFVNHKKLV AGDSIVFLRA ENGDLCVGIL RAKRGIGSGY EYPSGWNSGG  240
GSCGSHFGGY TPFLREEESK LMRKDSDGNL RRRVTAESVI EAATRAANRQ PFEVVYYPRA  300
STPEFCVKAS SVRAAMQIQW YPGMRFKMAF ETEDSSRISW FMGTISTAQV VDPIRWPNSL  360
WRLLQVAWDE PDLLHNVKRI SPWLVELVTN MPAIHLNPFS PPRKKMRLPQ DSDFSSLGQI  420
PMPSFSGNSF RSSSPVCCIT DNIPGGIQGA RHAPFGLSSS DLPSNKLHSG LFPLGFHQLD  480
HTAPPARLSS DNLFSDNGNN RSISSLLTTG NPTLSLKESN EIKTPHILLF GQPIFSEQQG  540
SQSCSGDTVG NSSSDGNTEK TAISSDGSGS ALHQSARENP SDEGSPWFKE HKKTDLGLEI  600
GHCKVFTESE NVGRTLDLSV LGSYKELYGK LANMFGIESS KMLSSVLYRD AAGSVKHTGD  660
EPFSEFLKTA RRLTILMDSG SDNIGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein