PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746538.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 404aa MW: 44892.4 Da PI: 8.4036

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1.1e-33	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF++av+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl XP_022746538.1 44 KPRLKWTPDLHERFIQAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 98 79****************************************************8 PP
2	Myb_DNA-binding	65.8	8.1e-21	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+kt+++ mg g+tl+++ks++qky+ XP_022746538.1 46 RLKWTPDLHERFIQAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 97 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MYHQHQGKNI HPSSRMPFPS DRHLFLQGGN GHGDSGLVLS SDAKPRLKWT PDLHERFIQA 60 VNQLGGADKA TPKTVMKLMG IPGLTLYHLK SHLQKYRLSK NLHGQANNGS NKIGVVAMAG 120 DRMSEANATH MNNLSTGPQT NKGIPIGEAL QMQIEVQRRL HEQLEVQRHL QLRIEAQGKY 180 LQAVLEKAQE TLGRQSLGTV GLEAAKVQLS ELVSKVSNRL NSAFPDLKDL QGLCPQQPTD 240 CSMDSCLTSC EVYQKEQEIH NNGMCLRPYS SCSFLEQRDQ TAEDPLLRQT ELKSFDDMKQ 300 NKMFLSSIGK HAERRTFLAD RSCGELSMSV GLQGEKGNGS NNNNNSSNSS SFSEGKFKGR 360 NEESRSADRV NRLPYFATNL DLNVHENDAA SSCKQFDLNG LSWS

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MYHQHQGKNI HPSSRMPFPS DRHLFLQGGN GHGDSGLVLS SDAKPRLKWT PDLHERFIQA  60
VNQLGGADKA TPKTVMKLMG IPGLTLYHLK SHLQKYRLSK NLHGQANNGS NKIGVVAMAG  120
DRMSEANATH MNNLSTGPQT NKGIPIGEAL QMQIEVQRRL HEQLEVQRHL QLRIEAQGKY  180
LQAVLEKAQE TLGRQSLGTV GLEAAKVQLS ELVSKVSNRL NSAFPDLKDL QGLCPQQPTD  240
CSMDSCLTSC EVYQKEQEIH NNGMCLRPYS SCSFLEQRDQ TAEDPLLRQT ELKSFDDMKQ  300
NKMFLSSIGK HAERRTFLAD RSCGELSMSV GLQGEKGNGS NNNNNSSNSS SFSEGKFKGR  360
NEESRSADRV NRLPYFATNL DLNVHENDAA SSCKQFDLNG LSWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-151	G2-like family protein