PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022746581.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 576aa    MW: 63660 Da    PI: 5.3951
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022746581.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B378.57.2e-25117218199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f k+ltpsd+++ g +++p+ +a+++        +++ +  tl+++d +g +We+++iyr++++r++lt+GW++Fv++++L +gD+vvF+  ++ 
  XP_022746581.1 117 FAKILTPSDANNGGGFSVPRFCADSIfppldynAEPPVQ--TLSITDVRGGVWEFRHIYRGTPRRHLLTTGWSKFVNQKKLIAGDSVVFM--RDC 207
                     89*********************999****985444444..8************************************************..568 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     +++++++v+r+
  XP_022746581.1 208 NGKMFIGVRRA 218
                     9999****986 PP
2Auxin_resp84.91.6e-28257339283
      Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                     a++a+++ +FevvY+Pr ++++Fvv+++ ve+ l++ ++ G+R+kma+etedss+ ++ +Gtv++   +d+  W +S+Wr+L+
  XP_022746581.1 257 AERAASGLPFEVVYYPRDGWADFVVRAQLVEAGLNTFWAEGTRVKMAVETEDSSRMTWlQGTVMSAAVADSGPWIGSPWRMLQ 339
                     5789999**************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    
MPPPQPPTRP ELCHVDSRIW QACAGSSVQI PTVNSRVYYF PQGHMEQACG STQLLPSLLL  60
SRPLIPCIIS EVHCLADAKT DEAFAKLILV PVEPSRLPNQ FLDINGEDEG SDKVVSFAKI  120
LTPSDANNGG GFSVPRFCAD SIFPPLDYNA EPPVQTLSIT DVRGGVWEFR HIYRGTPRRH  180
LLTTGWSKFV NQKKLIAGDS VVFMRDCNGK MFIGVRRAMK RGEARGYSGR WREPNDGGAM  240
KGEGRGRMTL EAVAESAERA ASGLPFEVVY YPRDGWADFV VRAQLVEAGL NTFWAEGTRV  300
KMAVETEDSS RMTWLQGTVM SAAVADSGPW IGSPWRMLQV AWDEPEVLQN ASRVSPWQVE  360
IVSSSPLHSS FPLAKRFKFS QDSGPTDAEG EIFFPTTGLT NSIMGYINPS LLKYYCFPAG  420
MQGARQNHFH LQSNSVSENT PMMSIDNFSG NYVMPKLDRI STELNIGSSQ SDNLSPDSQS  480
SMVSFGTELT ENGGCNSSKV GVSSFQLFGK IIHMKEPMVS RFEEVGCMED DDGKRYDEAV  540
SLKNSLDLSM TYSYSKLLDR LDVQCQRASA FEGFSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77850.11e-168ARF family protein