PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746594.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 357aa MW: 41249.2 Da PI: 9.7025

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746594.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.3e-18	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rWT+eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw++yl XP_022746594.1 4 RQRWTAEEDALLRAYVKQYGPREWNLVSQRMNapLNRDAKSCLERWNNYL 53 89***********************************************7 PP
2	Myb_DNA-binding	38.2	3.3e-12	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_022746594.1 59 KGSLTEEEQHLVICLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MKERQRWTAE EDALLRAYVK QYGPREWNLV SQRMNAPLNR DAKSCLERWN NYLKPGIKKG 60 SLTEEEQHLV ICLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKEKNKTVDP 120 IEEGKYDKIL ETFAEKLVKE RHSSTFSMAT YNGGFLHTDP PSPAPTLLPS WLSNSSNASA 180 VRPPSPSVTL SLSPSTVAAA PSIPWLQPER MSENTPVVLG NIVPYGTVPP CGENLLVSEL 240 VECCRELEEG HHAWVAHKKE AAWRLRRVEL QLESEKACRR REKMKEIESK VKALREEQKA 300 TLDRIEAEYR EQLERLRRDA EAKEQKLAEQ WTAKHLRLTK FLEQMGCRTR LAEPNVR

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MKERQRWTAE EDALLRAYVK QYGPREWNLV SQRMNAPLNR DAKSCLERWN NYLKPGIKKG  60
SLTEEEQHLV ICLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKEKNKTVDP  120
IEEGKYDKIL ETFAEKLVKE RHSSTFSMAT YNGGFLHTDP PSPAPTLLPS WLSNSSNASA  180
VRPPSPSVTL SLSPSTVAAA PSIPWLQPER MSENTPVVLG NIVPYGTVPP CGENLLVSEL  240
VECCRELEEG HHAWVAHKKE AAWRLRRVEL QLESEKACRR REKMKEIESK VKALREEQKA  300
TLDRIEAEYR EQLERLRRDA EAKEQKLAEQ WTAKHLRLTK FLEQMGCRTR LAEPNVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-150	MYB family protein