PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746646.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 635aa MW: 69952.8 Da PI: 7.791

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746646.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.6	2.4e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + + XP_022746646.1 121 FAKILTRSDANNGGGFSVPRYCAEKIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAE 211 89**************************996555555..89*******************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v ++r+ XP_022746646.1 212 NGDLCVCIRRA 222 8889**996 PP
2	Auxin_resp	114.5	9.7e-38	284	367	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a++++ FevvY+Prast+eF+vk++ v++al+v++++GmRfkmafetedss++++ +Gt+++v+ +dp+rWp+S+Wr+L+ XP_022746646.1 284 AATLAANGQQFEVVYYPRASTPEFCVKASLVKAALQVPWCLGMRFKMAFETEDSSRISWfMGTISSVRVADPLRWPDSPWRLLQ 367 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MITFMDSNEK LKEMEKCLSS QLWHACAGGM VQMPSVNTKV LYFPQGHSEH ACGPVDFRNC 60 PRIPASILCR VAAVKFMADP ETDEVFAKIR LIPVGNNEPD FEDDGIGGIL GNETQEKLAS 120 FAKILTRSDA NNGGGFSVPR YCAEKIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT 180 PRRHLLTTGW STFVNHKKLV AGDSIVFLRA ENGDLCVCIR RAKRGIGGGH ESSSGWNAAG 240 GNCMVPYGGF SAFLREDGNK LMRLSSNSNL MGKGKVRPEQ VIEAATLAAN GQQFEVVYYP 300 RASTPEFCVK ASLVKAALQV PWCLGMRFKM AFETEDSSRI SWFMGTISSV RVADPLRWPD 360 SPWRLLQVTW DEPDLLHNVQ GVSPWLVELV SNMPAIHLYP LSPPRKKLRL SQHPDFPLDG 420 QLPLPIVSGN LLRLNNPFWC LPKTTPAGMQ GARHAQYGLS LSDLHFNKLQ SGLFQVGFPL 480 LNHAATPNKT SNGGAIVQKP SMSENVSCML TMAHSTQNSK KTDDAKTTQL VLFGQTILTE 540 QQISLSCSDD VVSPVLTGNS SSGGNMDKKA KFSDGSGFAI HEQGLPGRPS CEVFPWYKDN 600 RQETEPNSET GHGKVLMESE DACRTLDLSS LRSYD

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MITFMDSNEK LKEMEKCLSS QLWHACAGGM VQMPSVNTKV LYFPQGHSEH ACGPVDFRNC  60
PRIPASILCR VAAVKFMADP ETDEVFAKIR LIPVGNNEPD FEDDGIGGIL GNETQEKLAS  120
FAKILTRSDA NNGGGFSVPR YCAEKIFPRL DYSADPPVQT ILAKDVHGET WKFRHIYRGT  180
PRRHLLTTGW STFVNHKKLV AGDSIVFLRA ENGDLCVCIR RAKRGIGGGH ESSSGWNAAG  240
GNCMVPYGGF SAFLREDGNK LMRLSSNSNL MGKGKVRPEQ VIEAATLAAN GQQFEVVYYP  300
RASTPEFCVK ASLVKAALQV PWCLGMRFKM AFETEDSSRI SWFMGTISSV RVADPLRWPD  360
SPWRLLQVTW DEPDLLHNVQ GVSPWLVELV SNMPAIHLYP LSPPRKKLRL SQHPDFPLDG  420
QLPLPIVSGN LLRLNNPFWC LPKTTPAGMQ GARHAQYGLS LSDLHFNKLQ SGLFQVGFPL  480
LNHAATPNKT SNGGAIVQKP SMSENVSCML TMAHSTQNSK KTDDAKTTQL VLFGQTILTE  540
QQISLSCSDD VVSPVLTGNS SSGGNMDKKA KFSDGSGFAI HEQGLPGRPS CEVFPWYKDN  600
RQETEPNSET GHGKVLMESE DACRTLDLSS LRSYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein