PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746687.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 362aa MW: 40566.6 Da PI: 6.6466

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.4	9.5e-20	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++++G g+W++ ++ g++R++k+c++rw +yl XP_022746687.1 15 KGPWTPEEDQILVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	56.1	8.6e-18	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ ++++++ lG++ W++Ia +++ gRt++++k++w+++l XP_022746687.1 68 RGKFSEEEEQTIINLHAVLGNK-WSAIATHLP-GRTDNEIKNFWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MMGRSSCCDE NGLKKGPWTP EEDQILVDYI QKHGHGSWRA LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSEEEEQTII NLHAVLGNKW SAIATHLPGR TDNEIKNFWN THLKKKLLQM 120 GIDPVTHRPR TDHLNILANL PQLLATANFN NLMNIPLDIN TLRLQSDAAQ LAKIHLLHSI 180 LQVLGTSSSN TPPTMEAMNL LAGPTFRENQ LYELLRINSQ LEGNTSNLPF GFAPHELTQL 240 QSNFLNLEAS QHQAQFSEYH QPMKDLKICA NSNDQFASSL SSPAIPTSTP QLPALVPASP 300 ERRPATTVNQ TENKINPNDP ISNPSSTSTT FEAWGDLMDD EASDSYWRDI IDQTSSQSWS 360 IS

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MMGRSSCCDE NGLKKGPWTP EEDQILVDYI QKHGHGSWRA LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSEEEEQTII NLHAVLGNKW SAIATHLPGR TDNEIKNFWN THLKKKLLQM  120
GIDPVTHRPR TDHLNILANL PQLLATANFN NLMNIPLDIN TLRLQSDAAQ LAKIHLLHSI  180
LQVLGTSSSN TPPTMEAMNL LAGPTFRENQ LYELLRINSQ LEGNTSNLPF GFAPHELTQL  240
QSNFLNLEAS QHQAQFSEYH QPMKDLKICA NSNDQFASSL SSPAIPTSTP QLPALVPASP  300
ERRPATTVNQ TENKINPNDP ISNPSSTSTT FEAWGDLMDD EASDSYWRDI IDQTSSQSWS  360
IS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	1e-124	MYB family protein